Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
APOEP02649 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
APOEP02649 RNU6-31P-201ENST00000384388 108 ntBASIC3.25□□□□□ -1.89
APOEP02649 RNU6-185P-201ENST00000384421 107 ntBASIC3.25□□□□□ -1.89
APOEP02649 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
APOEP02649 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
APOEP02649 SAR1AP2-201ENST00000392696 594 ntBASIC3.25□□□□□ -1.89
APOEP02649 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.25□□□□□ -1.89
APOEP02649 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.25□□□□□ -1.89
APOEP02649 OR2AS1P-201ENST00000427827 319 ntBASIC3.25□□□□□ -1.89
APOEP02649 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AL662791.1-201ENST00000441992 928 ntBASIC3.25□□□□□ -1.89
APOEP02649 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.25□□□□□ -1.89
APOEP02649 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.25□□□□□ -1.89
APOEP02649 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
APOEP02649 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.25□□□□□ -1.89
APOEP02649 ATG10-AS1-201ENST00000504846 648 ntBASIC3.25□□□□□ -1.89
APOEP02649 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 UBL5P2-201ENST00000583788 219 ntBASIC3.25□□□□□ -1.89
APOEP02649 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
APOEP02649 AC005242.1-201ENST00000585658 438 ntBASIC3.25□□□□□ -1.89
APOEP02649 AL133393.1-201ENST00000603277 287 ntBASIC3.25□□□□□ -1.89
APOEP02649 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOEP02649 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.25□□□□□ -1.89
APOEP02649 MIR622-201ENST00000638396 96 ntBASIC3.25□□□□□ -1.89
APOEP02649 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOEP02649 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.25□□□□□ -1.89
APOEP02649 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
APOEP02649 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
APOEP02649 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOEP02649 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOEP02649 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.24□□□□□ -1.89
APOEP02649 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOEP02649 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
APOEP02649 RNU6-356P-201ENST00000384140 107 ntBASIC3.24□□□□□ -1.89
APOEP02649 RPL21P3-201ENST00000395517 478 ntBASIC3.24□□□□□ -1.89
APOEP02649 AL024507.1-201ENST00000412741 274 ntBASIC3.24□□□□□ -1.89
APOEP02649 RPL31P2-201ENST00000413849 377 ntBASIC3.24□□□□□ -1.89
APOEP02649 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
APOEP02649 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.24□□□□□ -1.89
APOEP02649 HIGD1AP11-201ENST00000438361 280 ntBASIC3.24□□□□□ -1.89
APOEP02649 HMGB3P6-201ENST00000444896 598 ntBASIC3.24□□□□□ -1.89
APOEP02649 HMGB1P26-201ENST00000452520 628 ntBASIC3.24□□□□□ -1.89
APOEP02649 RPS15AP1-201ENST00000457423 391 ntBASIC3.24□□□□□ -1.89
APOEP02649 AC146507.2-201ENST00000460608 476 ntBASIC3.24□□□□□ -1.89
APOEP02649 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.24□□□□□ -1.89
APOEP02649 RN7SKP282-201ENST00000516824 299 ntBASIC3.24□□□□□ -1.89
APOEP02649 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.24□□□□□ -1.89
APOEP02649 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.24□□□□□ -1.89
APOEP02649 AC022616.2-201ENST00000523185 300 ntBASIC3.24□□□□□ -1.89
APOEP02649 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.24□□□□□ -1.89
APOEP02649 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.24□□□□□ -1.89
APOEP02649 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.24□□□□□ -1.89
APOEP02649 AC017100.2-201ENST00000584628 355 ntBASIC3.24□□□□□ -1.89
APOEP02649 HMGN2P28-201ENST00000606102 262 ntBASIC3.24□□□□□ -1.89
APOEP02649 AC084036.1-201ENST00000609190 508 ntBASIC3.24□□□□□ -1.89
APOEP02649 AC100793.4-201ENST00000613683 429 ntBASIC3.24□□□□□ -1.89
APOEP02649 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOEP02649 AC243756.2-201ENST00000618406 463 ntBASIC3.24□□□□□ -1.89
APOEP02649 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.24□□□□□ -1.89
APOEP02649 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
APOEP02649 AL157700.1-201ENST00000561973 1432 ntBASIC3.24□□□□□ -1.89
APOEP02649 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.24□□□□□ -1.89
APOEP02649 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOEP02649 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOEP02649 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
APOEP02649 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOEP02649 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.23□□□□□ -1.89
APOEP02649 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOEP02649 RPL7P25-201ENST00000404151 721 ntBASIC3.23□□□□□ -1.89
APOEP02649 AC093151.1-201ENST00000427711 313 ntBASIC3.23□□□□□ -1.89
APOEP02649 AC011242.1-201ENST00000433596 1158 ntBASIC3.23□□□□□ -1.89
APOEP02649 AC023347.2-201ENST00000433994 462 ntBASIC3.23□□□□□ -1.89
APOEP02649 YWHAZP7-201ENST00000436906 631 ntBASIC3.23□□□□□ -1.89
APOEP02649 GAPDHP27-201ENST00000447427 1020 ntBASIC3.23□□□□□ -1.89
APOEP02649 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.23□□□□□ -1.89
APOEP02649 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
APOEP02649 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOEP02649 RN7SKP272-201ENST00000516988 232 ntBASIC3.23□□□□□ -1.89
APOEP02649 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
APOEP02649 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.23□□□□□ -1.89
APOEP02649 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.23□□□□□ -1.89
APOEP02649 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.23□□□□□ -1.89
APOEP02649 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.23□□□□□ -1.89
APOEP02649 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
APOEP02649 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.23□□□□□ -1.89
APOEP02649 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.23□□□□□ -1.89
APOEP02649 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.23□□□□□ -1.89
APOEP02649 AC124312.4-201ENST00000605533 310 ntBASIC3.23□□□□□ -1.89
APOEP02649 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOEP02649 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.23□□□□□ -1.89
APOEP02649 AL590240.3-201ENST00000621416 943 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms