Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC093663.2-201ENST00000484625 313 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.29□□□□□ -1.88
COL1A1P02452 RN7SKP5-201ENST00000517045 272 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.29□□□□□ -1.88
COL1A1P02452 SERPINE4P-201ENST00000554978 281 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.29□□□□□ -1.88
COL1A1P02452 MIR7111-201ENST00000619751 72 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 AC010338.1-201ENST00000621823 717 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 AC092608.2-201ENST00000624427 218 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL1A1P02452 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
COL1A1P02452 TAB3P1-202ENST00000452645 1634 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL1A1P02452 GTF2H2B-203ENST00000508065 1432 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL1A1P02452 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL1A1P02452 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC105402.1-201ENST00000413336 545 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.28□□□□□ -1.88
COL1A1P02452 HMGB3P10-201ENST00000434734 572 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.28□□□□□ -1.88
COL1A1P02452 SRIP1-201ENST00000489235 288 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 RNA5SP24-201ENST00000516478 95 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.28□□□□□ -1.88
COL1A1P02452 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 MTND5P19-201ENST00000424872 1794 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 ASNSP3-201ENST00000451989 1306 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL1A1P02452 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL1A1P02452 MIR3074-201ENST00000384885 81 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL1A1P02452 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.28□□□□□ -1.88
COL1A1P02452 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.28□□□□□ -1.88
COL1A1P02452 AL603825.1-201ENST00000438481 80 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.28□□□□□ -1.88
COL1A1P02452 AL162388.1-201ENST00000450912 352 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.28□□□□□ -1.88
COL1A1P02452 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.28□□□□□ -1.88
COL1A1P02452 ATP5F1P5-201ENST00000526403 760 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 AP001646.1-201ENST00000527936 915 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.28□□□□□ -1.88
COL1A1P02452 SNORD39.2-201ENST00000579995 76 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 ZNF861P-201ENST00000588126 639 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 AC083760.1-201ENST00000589621 670 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.28□□□□□ -1.88
COL1A1P02452 AC005046.1-201ENST00000608515 625 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 AC090115.4-201ENST00000609970 188 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 AL020991.1-201ENST00000612314 373 ntBASIC3.28□□□□□ -1.88
COL1A1P02452 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
COL1A1P02452 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.27□□□□□ -1.89
COL1A1P02452 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.27□□□□□ -1.89
COL1A1P02452 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.27□□□□□ -1.89
COL1A1P02452 MIR181B1-201ENST00000385240 110 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 VDAC1P3-201ENST00000434069 851 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.27□□□□□ -1.89
COL1A1P02452 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
COL1A1P02452 RNA5SP282-201ENST00000516355 108 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 AC109329.2-201ENST00000519658 482 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 AL109741.3-201ENST00000561748 592 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.27□□□□□ -1.89
COL1A1P02452 AL450489.1-201ENST00000612071 468 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.27□□□□□ -1.89
COL1A1P02452 AC064859.1-201ENST00000624741 174 ntBASIC3.27□□□□□ -1.89
COL1A1P02452 OR11H5P-202ENST00000641612 1325 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL1A1P02452 RNA5SP68-201ENST00000363885 119 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL1A1P02452 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 RPL5P19-201ENST00000404228 893 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 RN7SKP192-201ENST00000411291 327 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.26□□□□□ -1.89
COL1A1P02452 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.26□□□□□ -1.89
COL1A1P02452 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.26□□□□□ -1.89
COL1A1P02452 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.26□□□□□ -1.89
COL1A1P02452 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.26□□□□□ -1.89
COL1A1P02452 CACYBPP2-201ENST00000453625 678 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 RPL23AP31-201ENST00000456160 467 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.26□□□□□ -1.89
COL1A1P02452 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 DYNLL1P6-201ENST00000503440 264 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 VTA1P2-201ENST00000520205 911 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
COL1A1P02452 AC009159.1-201ENST00000618386 642 ntBASIC3.26□□□□□ -1.89
COL1A1P02452 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.26□□□□□ -1.89
COL1A1P02452 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
COL1A1P02452 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.26□□□□□ -1.89
COL1A1P02452 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
COL1A1P02452 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms