Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC111188.2-201ENST00000529697 1387 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC005183.1-201ENST00000603687 1979 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RPL7P26-201ENST00000333817 754 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RNU6-263P-201ENST00000363811 107 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 SNORA70.2-201ENST00000364506 135 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 SNORA51.4-201ENST00000364993 124 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 SNORD116-23-201ENST00000384645 92 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL035405.1-201ENST00000400795 710 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 HSPE1P26-201ENST00000405341 275 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL445189.1-201ENST00000405722 338 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 ZNF602P-201ENST00000405929 924 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RAB28P1-201ENST00000411517 641 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL024507.1-201ENST00000412741 274 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 BMS1P22-201ENST00000414726 313 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC006960.1-201ENST00000419980 153 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC096632.1-201ENST00000427395 310 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RPL7P2-201ENST00000427639 268 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC092634.2-201ENST00000428146 1010 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RPS27AP12-201ENST00000429552 465 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RN7SL594P-201ENST00000470590 287 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC023598.1-201ENST00000472521 361 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC104629.1-201ENST00000494226 508 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 SETP14-201ENST00000497538 873 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RNF138P1-201ENST00000502765 546 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 MTCO3P44-201ENST00000510977 541 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RNU2-58P-201ENST00000516403 183 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 RNU6-885P-201ENST00000516607 104 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 MED28P5-201ENST00000528254 438 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC023161.2-201ENST00000551218 780 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC068620.3-201ENST00000602749 560 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 IGKV1OR2-118-201ENST00000603238 347 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL606490.9-201ENST00000603331 271 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC006077.1-201ENST00000604746 343 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC124016.2-201ENST00000610058 665 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC083809.1-201ENST00000615051 472 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AP000720.1-201ENST00000625091 483 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC017071.1-201ENST00000564407 2204 ntBASIC2.64□□□□□ -1.99
HLA-DQA1P01909 AC007656.2-201ENST00000624902 4547 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNU6-582P-201ENST00000362989 107 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC234772.1-201ENST00000377927 937 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RPL21P3-201ENST00000395517 478 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNA5SP317-201ENST00000410176 116 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RN7SKP58-201ENST00000411010 305 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RNA5SP311-201ENST00000411290 116 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 RPL32P35-201ENST00000415214 394 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 FCF1P2-201ENST00000415284 583 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 TOMM22P1-201ENST00000418578 312 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 OFD1P18Y-201ENST00000420889 959 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 MTCYBP32-201ENST00000427945 1084 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 SETP5-201ENST00000437270 562 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 CYCSP43-201ENST00000438233 310 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 COX6CP18-201ENST00000448769 222 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC104073.1-201ENST00000451988 151 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 NDUFA5P7-201ENST00000452914 242 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC244505.3-201ENST00000454598 187 ntBASIC2.63□□□□□ -1.99
HLA-DQA1P01909 AC146507.2-201ENST00000460608 476 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms