Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RPL32P3-201ENST00000359025 275 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 RNA5SP509-201ENST00000364577 119 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 SNORD116-23-201ENST00000384645 92 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 HSPE1P8-201ENST00000406997 288 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 MIR1302-8-201ENST00000408342 128 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 RN7SKP285-201ENST00000410137 318 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 RNU4-25P-201ENST00000410569 230 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AL136133.1-201ENST00000413694 376 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC090960.1-201ENST00000421072 306 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC002075.2-201ENST00000425207 252 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.77□□□□□ -1.81
CLPTM1O96005 RPS29P17-201ENST00000430795 166 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 MTCO2P25-201ENST00000447065 681 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.77□□□□□ -1.81
CLPTM1O96005 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 RPL12P26-201ENST00000452430 487 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 RPS15AP1-201ENST00000457423 391 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 NF1P3-201ENST00000457709 450 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 RN7SL98P-201ENST00000462271 300 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 RPL5P24-201ENST00000463742 885 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.77□□□□□ -1.81
CLPTM1O96005 RPL23AP14-201ENST00000468281 468 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 RPL7P18-201ENST00000478965 734 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 CEACAMP10-202ENST00000495431 496 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 UBE2CP3-201ENST00000502715 450 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC109445.1-201ENST00000512356 383 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC090888.1-201ENST00000561335 1141 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC022069.1-201ENST00000582910 658 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC006539.2-201ENST00000601729 572 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC073348.1-201ENST00000623002 331 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.77□□□□□ -1.81
CLPTM1O96005 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1O96005 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.77□□□□□ -1.81
CLPTM1O96005 AC007671.2-201ENST00000637344 619 ntBASIC3.77□□□□□ -1.81
CLPTM1O96005 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1O96005 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLPTM1O96005 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLPTM1O96005 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLPTM1O96005 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1O96005 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 ZNF542P-204ENST00000482727 1305 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 RIOK3P1-201ENST00000418778 1528 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.76□□□□□ -1.81
CLPTM1O96005 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1O96005 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AC009237.5-201ENST00000414271 501 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.76□□□□□ -1.81
CLPTM1O96005 BOLA3P4-201ENST00000418151 400 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 MFSD13B-201ENST00000420133 1290 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 RPL21P109-201ENST00000422213 475 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 CHIAP3-201ENST00000423668 1133 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 C4BPAP2-201ENST00000428434 478 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 RPS3AP54-201ENST00000435535 734 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AL354941.1-201ENST00000438600 464 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 HMGN2P21-201ENST00000447764 270 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AL109741.2-201ENST00000455561 343 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 RPS20P32-201ENST00000456044 356 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
CLPTM1O96005 MTND1P16-201ENST00000465177 898 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 RN7SL810P-201ENST00000493031 276 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLPTM1O96005 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.76□□□□□ -1.81
CLPTM1O96005 RN7SKP31-201ENST00000516354 278 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 RNU6-759P-201ENST00000516740 103 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AP001207.1-201ENST00000524051 481 ntBASIC3.76□□□□□ -1.81
CLPTM1O96005 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.76□□□□□ -1.81
CLPTM1O96005 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.76□□□□□ -1.81
CLPTM1O96005 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.76□□□□□ -1.81
CLPTM1O96005 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms