Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.92□□□□□ -1.78
NKX2-2O95096 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-2O95096 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX2-2O95096 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-2O95096 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-2O95096 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-2O95096 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-2O95096 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NKX2-2O95096 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-2O95096 RNU1-32P-201ENST00000363937 159 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 MTATP6P27-201ENST00000416987 621 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-2O95096 AC019178.2-201ENST00000423595 505 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC007742.1-201ENST00000425789 329 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-2O95096 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-2O95096 ELOCP26-201ENST00000436067 329 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 OR6C5P-201ENST00000452388 923 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 RAD23BP3-201ENST00000454157 1152 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 snoU109.4-201ENST00000458953 143 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC072039.1-201ENST00000477611 581 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 RPS29P19-201ENST00000479709 171 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-2O95096 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 AC093809.1-201ENST00000509155 340 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 PARP4P3-201ENST00000510265 317 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC093840.1-201ENST00000511599 336 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 KCTD9P2-201ENST00000512203 1013 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.91□□□□□ -1.78
NKX2-2O95096 IFITM8P-201ENST00000522529 394 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-2O95096 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-2O95096 AC087373.1-201ENST00000524920 491 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 OR5M7P-201ENST00000526140 972 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-2O95096 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.91□□□□□ -1.78
NKX2-2O95096 EEF1B2P4-201ENST00000551398 348 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-2O95096 MIR4277-201ENST00000578298 84 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-2O95096 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 DUXAP11-201ENST00000603858 526 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC121247.2-201ENST00000604776 136 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC010738.1-201ENST00000604970 987 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC097065.2-201ENST00000608159 533 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 OR6R2P-201ENST00000609216 300 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 AC064801.1-201ENST00000612025 407 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-2O95096 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 CU459211.1-201ENST00000635667 749 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 MIR3974-201ENST00000637126 96 ntBASIC3.91□□□□□ -1.78
NKX2-2O95096 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-2O95096 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-2O95096 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NKX2-2O95096 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-2O95096 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-2O95096 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.9□□□□□ -1.78
NKX2-2O95096 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-2O95096 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.9□□□□□ -1.78
NKX2-2O95096 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-2O95096 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-2O95096 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-2O95096 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-2O95096 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-2O95096 RNU6-263P-201ENST00000363811 107 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 RNU6-343P-201ENST00000364709 104 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 RNA5SP366-201ENST00000365454 123 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.9□□□□□ -1.79
NKX2-2O95096 SNORD51-201ENST00000384320 80 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 HSPD1P16-201ENST00000402302 394 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 RNU2-15P-201ENST00000410692 191 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-2O95096 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-2O95096 AC009518.2-201ENST00000418056 731 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-2O95096 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.9□□□□□ -1.79
NKX2-2O95096 MTCYBP39-201ENST00000437562 491 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.9□□□□□ -1.79
NKX2-2O95096 MTCO1P27-201ENST00000448269 226 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 BX322784.1-201ENST00000455793 1077 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AP001992.1-205ENST00000462248 379 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 SYPL1P1-201ENST00000473622 768 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AC041039.1-201ENST00000485656 536 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 FAM172BP-201ENST00000487497 1089 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-2O95096 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-2O95096 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.9□□□□□ -1.79
NKX2-2O95096 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.9□□□□□ -1.79
NKX2-2O95096 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.9□□□□□ -1.79
NKX2-2O95096 RNU6-27P-201ENST00000516146 107 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 Y_RNA.688-201ENST00000516565 95 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AC134698.5-201ENST00000519444 336 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AC009643.1-201ENST00000532030 391 ntBASIC3.9□□□□□ -1.79
NKX2-2O95096 AC069240.1-201ENST00000548774 375 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms