Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.81□□□□□ -1.96
UPK1BO75841 SAGE4P-201ENST00000442271 3381 ntBASIC2.81□□□□□ -1.96
UPK1BO75841 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1BO75841 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 MTCO1P6-201ENST00000481192 1384 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 MTND4P34-201ENST00000572715 1371 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC008432.1-201ENST00000615912 1320 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RNU6-792P-201ENST00000363490 107 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 DEFB109C-201ENST00000382575 264 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 DEFB109B-201ENST00000382656 264 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RNU6-213P-201ENST00000384051 104 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RNU6-481P-201ENST00000384194 107 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
UPK1BO75841 RNU6-837P-201ENST00000391056 108 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC008173.1-201ENST00000418901 264 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC009237.2-201ENST00000421358 284 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 HSFY1P1-201ENST00000423928 1178 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RPL7P46-201ENST00000425129 740 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1BO75841 AL009174.1-201ENST00000426577 416 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC096632.1-201ENST00000427395 310 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 USP9YP9-201ENST00000429406 715 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 AL512661.1-201ENST00000434586 1253 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 CEACAMP9-201ENST00000442990 513 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 SSXP4-201ENST00000451349 245 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RPS24P6-201ENST00000452670 400 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 MTND2P30-201ENST00000456663 382 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 PRDX3P4-201ENST00000470828 747 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AL136126.1-201ENST00000473603 402 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RPL23AP11-201ENST00000475260 469 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RPS27AP1-201ENST00000475545 471 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC012181.1-201ENST00000479895 423 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC013356.1-201ENST00000489027 564 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RPS4XP14-201ENST00000493072 781 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RN7SL323P-201ENST00000494712 295 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.8□□□□□ -1.96
UPK1BO75841 MTCO2P32-201ENST00000514865 403 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RN7SKP282-201ENST00000516824 299 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AP003385.6-201ENST00000531603 374 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AP000916.1-201ENST00000533869 835 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1BO75841 AC005476.1-201ENST00000554427 397 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC044860.2-201ENST00000561005 179 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 LINC00557-201ENST00000563184 1279 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC010653.1-201ENST00000571108 881 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1BO75841 AC099676.1-201ENST00000608886 657 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC006963.1-201ENST00000624003 1052 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 AC106730.3-201ENST00000624568 641 ntBASIC2.8□□□□□ -1.96
UPK1BO75841 CCT5-215ENST00000625723 135 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1BO75841 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.8□□□□□ -1.96
UPK1BO75841 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1BO75841 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1BO75841 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
UPK1BO75841 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1BO75841 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1BO75841 MTND5P31-201ENST00000419366 1374 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 ASNSP3-201ENST00000451989 1306 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 RNA5SP258-201ENST00000362750 119 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 RNVU1-3-201ENST00000364313 161 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UPK1BO75841 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
UPK1BO75841 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1BO75841 AL158050.1-201ENST00000416077 457 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 AC073508.1-201ENST00000428866 656 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.79□□□□□ -1.96
UPK1BO75841 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1BO75841 RABEPKP1-201ENST00000440529 1026 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1BO75841 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1BO75841 OR2AF1P-201ENST00000454899 889 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.79□□□□□ -1.96
UPK1BO75841 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1BO75841 AC011352.3-201ENST00000505162 593 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 MTND4LP22-201ENST00000508209 276 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 AC004062.1-201ENST00000509926 645 ntBASIC2.79□□□□□ -1.96
UPK1BO75841 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1BO75841 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1BO75841 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1BO75841 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.79□□□□□ -1.96
UPK1BO75841 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.79□□□□□ -1.96
UPK1BO75841 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1BO75841 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.79□□□□□ -1.96
UPK1BO75841 AL513477.2-201ENST00000607858 568 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms