Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR6C73P-201ENST00000546432 358 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.22□□□□□ -1.89
SHOX2O60902 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.22□□□□□ -1.89
SHOX2O60902 AC010928.3-201ENST00000587712 541 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 AC083760.1-201ENST00000589621 670 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.22□□□□□ -1.89
SHOX2O60902 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.22□□□□□ -1.89
SHOX2O60902 MIR4496-201ENST00000635896 61 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 AL645937.1-201ENST00000641739 1652 ntBASIC3.22□□□□□ -1.89
SHOX2O60902 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.21□□□□□ -1.89
SHOX2O60902 AL157700.1-201ENST00000561973 1432 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SHOX2O60902 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHOX2O60902 MIR591-201ENST00000385290 95 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SHOX2O60902 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOX2O60902 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.21□□□□□ -1.9
SHOX2O60902 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.21□□□□□ -1.9
SHOX2O60902 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.21□□□□□ -1.9
SHOX2O60902 SETP8-201ENST00000435341 628 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.21□□□□□ -1.9
SHOX2O60902 AC233982.1-201ENST00000451247 436 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHOX2O60902 UBE2DNL-203ENST00000474922 222 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 RPL9P33-201ENST00000484311 566 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.21□□□□□ -1.9
SHOX2O60902 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.21□□□□□ -1.9
SHOX2O60902 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.21□□□□□ -1.9
SHOX2O60902 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.21□□□□□ -1.9
SHOX2O60902 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
SHOX2O60902 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.21□□□□□ -1.9
SHOX2O60902 AC107982.3-201ENST00000584957 985 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 AC091488.1-201ENST00000604239 660 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.21□□□□□ -1.9
SHOX2O60902 AC016877.3-201ENST00000606778 504 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 MIR6715A-201ENST00000615929 79 ntBASIC3.21□□□□□ -1.9
SHOX2O60902 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHOX2O60902 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.21□□□□□ -1.9
SHOX2O60902 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHOX2O60902 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHOX2O60902 DDX6P1-205ENST00000441966 1436 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SHOX2O60902 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SHOX2O60902 NACA3P-201ENST00000359690 648 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.2□□□□□ -1.9
SHOX2O60902 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
SHOX2O60902 VDAC1P3-201ENST00000434069 851 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.2□□□□□ -1.9
SHOX2O60902 XKRYP6-201ENST00000440468 1116 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 XKRYP3-201ENST00000442113 1116 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.2□□□□□ -1.9
SHOX2O60902 NPM1P49-201ENST00000448027 714 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
SHOX2O60902 RPL21P41-201ENST00000459863 264 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.2□□□□□ -1.9
SHOX2O60902 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.2□□□□□ -1.9
SHOX2O60902 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.2□□□□□ -1.9
SHOX2O60902 AC108157.1-201ENST00000510511 539 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AC093755.1-201ENST00000512950 1023 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AC008562.1-201ENST00000521763 330 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 COX6B1P6-201ENST00000522347 255 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.2□□□□□ -1.9
SHOX2O60902 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.2□□□□□ -1.9
SHOX2O60902 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.2□□□□□ -1.9
SHOX2O60902 BDH2P1-201ENST00000602288 736 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AL513477.2-201ENST00000607858 568 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 AC090912.3-201ENST00000609775 533 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 FAM157B-203ENST00000639350 358 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 MTND5P1-201ENST00000445440 1375 ntBASIC3.2□□□□□ -1.9
SHOX2O60902 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SHOX2O60902 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHOX2O60902 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHOX2O60902 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHOX2O60902 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 AL451074.5-201ENST00000415894 435 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 NUP35P2-201ENST00000416748 943 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.19□□□□□ -1.9
SHOX2O60902 MUPP-201ENST00000438111 566 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.19□□□□□ -1.9
SHOX2O60902 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 COX6CP2-201ENST00000444980 225 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.19□□□□□ -1.9
SHOX2O60902 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 AC006499.5-201ENST00000505037 514 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHOX2O60902 TRMT10BP1-201ENST00000519377 943 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.19□□□□□ -1.9
SHOX2O60902 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.19□□□□□ -1.9
SHOX2O60902 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.19□□□□□ -1.9
SHOX2O60902 AC005951.1-201ENST00000576706 485 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 AC023043.3-201ENST00000593113 385 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 MTCO3P22-201ENST00000603219 784 ntBASIC3.19□□□□□ -1.9
SHOX2O60902 BNIP3P10-201ENST00000605360 577 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms