Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR4278-201ENST00000636094 69 ntBASIC3.7□□□□□ -1.82
SNX3O60493 MTCO1P24-201ENST00000515438 1558 ntBASIC3.7□□□□□ -1.82
SNX3O60493 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SNX3O60493 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SNX3O60493 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX3O60493 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX3O60493 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX3O60493 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.69□□□□□ -1.82
SNX3O60493 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 MIR30E-201ENST00000362104 92 ntBASIC3.69□□□□□ -1.82
SNX3O60493 SNRPEP2-201ENST00000397592 279 ntBASIC3.69□□□□□ -1.82
SNX3O60493 EIF5P1-201ENST00000400019 1231 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX3O60493 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX3O60493 OFD1P18Y-201ENST00000420889 959 ntBASIC3.69□□□□□ -1.82
SNX3O60493 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 AC017083.1-201ENST00000428093 483 ntBASIC3.69□□□□□ -1.82
SNX3O60493 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX3O60493 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX3O60493 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
SNX3O60493 PABPC1P3-201ENST00000469174 459 ntBASIC3.69□□□□□ -1.82
SNX3O60493 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX3O60493 AC041039.1-201ENST00000485656 536 ntBASIC3.69□□□□□ -1.82
SNX3O60493 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.69□□□□□ -1.82
SNX3O60493 AC109445.1-201ENST00000512356 383 ntBASIC3.69□□□□□ -1.82
SNX3O60493 RNY4P37-201ENST00000516225 96 ntBASIC3.69□□□□□ -1.82
SNX3O60493 Y_RNA.717-201ENST00000517106 92 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.69□□□□□ -1.82
SNX3O60493 C1GALT1P3-201ENST00000522049 819 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
SNX3O60493 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.69□□□□□ -1.82
SNX3O60493 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 MIR4270-201ENST00000581799 70 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 AC013244.1-201ENST00000604279 193 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC069304.2-201ENST00000605154 435 ntBASIC3.69□□□□□ -1.82
SNX3O60493 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC087683.2-201ENST00000611384 326 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC121761.2-201ENST00000617300 689 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AC009318.4-201ENST00000620496 486 ntBASIC3.69□□□□□ -1.82
SNX3O60493 AL136964.1-201ENST00000622038 2990 ntBASIC3.69□□□□□ -1.82
SNX3O60493 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 ZNF734P-201ENST00000419494 1534 ntBASIC3.69□□□□□ -1.82
SNX3O60493 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX3O60493 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX3O60493 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX3O60493 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 AP000776.1-201ENST00000530032 1663 ntBASIC3.68□□□□□ -1.82
SNX3O60493 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX3O60493 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SNX3O60493 PWAR6-201ENST00000552334 4618 ntBASIC3.68□□□□□ -1.82
SNX3O60493 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX3O60493 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX3O60493 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SNX3O60493 Y_RNA.311-201ENST00000365068 96 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RNA5SP235-201ENST00000365411 114 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX3O60493 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 AL024474.1-201ENST00000404655 591 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AL590139.1-201ENST00000416267 400 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AL139421.1-201ENST00000423010 169 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX3O60493 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX3O60493 Z74696.2-201ENST00000436514 498 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC092427.1-201ENST00000439177 601 ntBASIC3.68□□□□□ -1.82
SNX3O60493 MTND2P20-201ENST00000440805 661 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX3O60493 RPS4XP2-201ENST00000458402 793 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RPL21P11-201ENST00000461458 483 ntBASIC3.68□□□□□ -1.82
SNX3O60493 MTND1P16-201ENST00000465177 898 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RPS23P7-201ENST00000466210 444 ntBASIC3.68□□□□□ -1.82
SNX3O60493 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC020893.1-201ENST00000502452 580 ntBASIC3.68□□□□□ -1.82
SNX3O60493 AC108078.3-201ENST00000502633 489 ntBASIC3.68□□□□□ -1.82
SNX3O60493 MTCYBP17-201ENST00000503579 789 ntBASIC3.68□□□□□ -1.82
SNX3O60493 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.68□□□□□ -1.82
SNX3O60493 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.68□□□□□ -1.82
SNX3O60493 NDUFA5P2-201ENST00000519723 344 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms