Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMAD6O43541 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 DCAF13P3-201ENST00000561147 1334 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 RNU1-15P-201ENST00000353977 144 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 RNA5SP130-201ENST00000364431 114 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 RNA5SP80-201ENST00000410475 111 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 TPMTP3-201ENST00000411928 735 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC007899.1-201ENST00000412776 775 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 MTND1P21-201ENST00000412991 285 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 AL356095.1-201ENST00000417217 199 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC092017.2-201ENST00000427600 362 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC073335.1-201ENST00000427776 363 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 DYNLL1P7-201ENST00000429273 258 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 MED14P1-201ENST00000430517 648 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 AL356276.2-201ENST00000435919 558 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 MTND1P30-201ENST00000441241 901 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 TPT1P7-201ENST00000458300 517 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC079804.1-201ENST00000461922 436 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 RPS26P28-201ENST00000470806 348 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC109486.1-201ENST00000486833 374 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 FTH1P9-201ENST00000513251 355 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.25□□□□□ -1.73
SMAD6O43541 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 AP001317.1-201ENST00000531194 960 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 TOMM20P2-201ENST00000540082 421 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC069240.1-201ENST00000548774 375 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.25□□□□□ -1.73
SMAD6O43541 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.25□□□□□ -1.73
SMAD6O43541 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC067852.4-201ENST00000590314 478 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.25□□□□□ -1.73
SMAD6O43541 AC103881.1-201ENST00000603476 538 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC010680.4-201ENST00000605334 543 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC131235.4-201ENST00000609288 620 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC024941.1-201ENST00000612250 334 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AL356266.1-201ENST00000623311 483 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC024023.1-201ENST00000624530 922 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 PCMTD1P7-201ENST00000634506 357 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC116618.1-201ENST00000634617 774 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMAD6O43541 RNF6P1-201ENST00000444889 1784 ntBASIC4.25□□□□□ -1.73
SMAD6O43541 AC005539.1-201ENST00000443768 1479 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 AC004520.1-201ENST00000608362 1413 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 METTL21EP-201ENST00000298105 713 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 RNU6-500P-201ENST00000362349 107 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 RNU6-543P-201ENST00000362576 108 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 RN7SKP227-201ENST00000364445 330 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SMAD6O43541 MIR124-3-201ENST00000384866 87 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 VN1R8P-201ENST00000407739 893 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 MTCYBP38-201ENST00000417160 1123 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 EIF1P1-201ENST00000421436 341 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 RBMY1KP-201ENST00000423480 476 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 SKP1P3-201ENST00000429280 487 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 MTCO1P3-201ENST00000429327 192 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 USP9YP31-201ENST00000431405 881 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC002542.1-201ENST00000440683 193 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC009263.1-201ENST00000441193 1239 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms