Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 MIR372-201ENST00000362225 67 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 RNU6-792P-201ENST00000363490 107 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK2O43353 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 MIR16-1-201ENST00000385271 89 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 MIR937-201ENST00000401271 86 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK2O43353 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RIPK2O43353 AC109780.2-201ENST00000413467 845 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK2O43353 AL357078.2-201ENST00000416486 427 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AC245291.1-201ENST00000419501 328 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 RPL21P32-201ENST00000419877 477 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK2O43353 DUTP6-201ENST00000425573 462 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AL117339.2-201ENST00000430475 180 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 SNRPEP4-201ENST00000435815 279 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK2O43353 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.54□□□□□ -1.84
RIPK2O43353 AC125238.1-201ENST00000448842 249 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 TRBV26-201ENST00000456572 344 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 MTND2P30-201ENST00000456663 382 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK2O43353 RPS23P3-201ENST00000470993 430 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 RPS4XP6-201ENST00000477670 797 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 MTND3P24-201ENST00000506306 329 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AC119751.1-201ENST00000513357 765 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 SNORA64.4-201ENST00000516632 81 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 RANP9-201ENST00000519957 271 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK2O43353 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK2O43353 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK2O43353 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK2O43353 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK2O43353 AL450489.1-201ENST00000612071 468 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 VN1R9P-201ENST00000614184 867 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AC068831.7-201ENST00000616954 363 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 AL356094.1-201ENST00000624663 1212 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 SNORA50A-202ENST00000629536 136 ntBASIC3.54□□□□□ -1.84
RIPK2O43353 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK2O43353 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK2O43353 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK2O43353 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RIPK2O43353 AL079305.1-201ENST00000623159 3008 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RIPK2O43353 ZNF826P-207ENST00000622273 1910 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 FRG1CP-201ENST00000358464 769 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 EI24P2-201ENST00000397776 1076 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 RNU4-27P-201ENST00000410889 139 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 YPEL5P1-201ENST00000419731 367 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AL606495.1-201ENST00000422100 813 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 RPS6P14-201ENST00000425165 719 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK2O43353 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 MTND4P15-201ENST00000437913 1033 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 ISCA1P2-201ENST00000438679 421 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 HSFY3P-201ENST00000444242 1191 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 RPL7P55-201ENST00000450522 746 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC104308.1-201ENST00000454621 333 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 RPL23AP67-201ENST00000465341 474 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 PRDX3P4-201ENST00000470828 747 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 VPS26AP1-201ENST00000483197 979 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK2O43353 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
RIPK2O43353 RNU6-1102P-201ENST00000516149 96 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK2O43353 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 AC011611.5-201ENST00000552477 578 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 MIR4284-201ENST00000578924 81 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RIPK2O43353 AC067852.3-201ENST00000589177 561 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 AL365400.2-201ENST00000605604 902 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AL445423.1-201ENST00000609941 536 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 MIR6716-201ENST00000613413 80 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC069209.1-201ENST00000619282 651 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC073342.3-201ENST00000624211 193 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC106730.3-201ENST00000624568 641 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 AC004972.1-201ENST00000623934 2209 ntBASIC3.53□□□□□ -1.84
RIPK2O43353 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RIPK2O43353 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
RIPK2O43353 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RIPK2O43353 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.53□□□□□ -1.85
RIPK2O43353 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RIPK2O43353 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RIPK2O43353 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms