Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ATP5F1P3-201ENST00000397213 657 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 VTA1P1-201ENST00000414044 866 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AL449283.1-202ENST00000418249 604 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC008173.1-201ENST00000418901 264 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AL035246.1-201ENST00000433554 1255 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC146507.2-201ENST00000460608 476 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC093752.1-206ENST00000511823 336 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 MTATP6P9-201ENST00000515039 680 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AL606834.3-201ENST00000602615 496 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC112230.1-201ENST00000604342 547 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AL162713.1-201ENST00000604480 262 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC011816.2-201ENST00000607089 556 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 AC099654.9-201ENST00000637055 678 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 GTF2H2B-203ENST00000508065 1432 ntBASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49D1C9J1S8 DCAF13P1-201ENST00000495256 1330 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 ZNF29P-201ENST00000225587 168 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 RNU5B-1-201ENST00000363286 116 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 SNORA5A-201ENST00000384111 134 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 SNORA70E-201ENST00000384492 135 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AL355615.1-201ENST00000406187 641 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC069218.2-201ENST00000411665 344 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 MTND4P11-201ENST00000417020 1058 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 SYF2P2-201ENST00000417620 583 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 RPL31P45-201ENST00000419532 356 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC093422.3-201ENST00000428506 305 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 MTND5P27-201ENST00000428871 1720 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC018644.1-201ENST00000429934 551 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 HMGB3P6-201ENST00000444896 598 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AL133547.1-201ENST00000448546 220 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC008280.2-201ENST00000455473 307 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 CEACAMP4-201ENST00000457676 421 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AP002884.2-201ENST00000471647 395 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC106707.2-201ENST00000484182 374 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 RPL7P38-201ENST00000488396 739 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 UBE2V1P12-201ENST00000503954 474 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 RN7SKP82-201ENST00000516786 223 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC018618.2-201ENST00000604770 446 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AP003117.2-201ENST00000606010 545 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AL355816.1-201ENST00000607951 118 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC107294.3-201ENST00000609211 526 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC073569.3-201ENST00000619055 682 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AF117829.1-206ENST00000621883 3802 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 CR392039.5-201ENST00000623201 510 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 AC138649.5-201ENST00000637456 137 ntBASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM49D1C9J1S8 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 RNU6-298P-201ENST00000390888 96 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 PTMAP2-201ENST00000397627 327 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 MIR1303-201ENST00000408625 86 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 BX842559.1-201ENST00000419615 532 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 PTP4A1P5-201ENST00000420305 455 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC246680.2-201ENST00000422106 389 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC073310.1-201ENST00000423226 1033 ntBASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM49D1C9J1S8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms