Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC107214.2-201ENST00000608204 634 ntBASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 AC092140.2-201ENST00000618027 521 ntBASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 MIR8059-201ENST00000620427 81 ntBASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 CR383658.2-201ENST00000547576 1525 ntBASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TBC1D3FA6NER0 AL031985.3-201ENST00000565390 2449 ntBASIC4.34□□□□□ -1.72
TBC1D3FA6NER0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
TBC1D3FA6NER0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
TBC1D3FA6NER0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TBC1D3FA6NER0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.34□□□□□ -1.72
TBC1D3FA6NER0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.34□□□□□ -1.72
TBC1D3FA6NER0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 MTCO1P23-201ENST00000415223 1526 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 MTND4P16-201ENST00000466108 1367 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 RNU6-952P-201ENST00000391164 108 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 SNORA11-201ENST00000408789 128 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP36-201ENST00000410197 133 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 TPMTP2-201ENST00000414372 726 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC092647.1-201ENST00000420654 287 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AL035410.1-201ENST00000427409 427 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AL512649.1-201ENST00000428997 581 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AL512286.1-201ENST00000439244 400 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC073587.1-201ENST00000447093 876 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC108022.1-201ENST00000493466 478 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC090453.1-201ENST00000495560 436 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 RNA5SP446-201ENST00000515955 82 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC023161.2-201ENST00000551218 780 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC024909.2-201ENST00000553035 286 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AL161713.1-201ENST00000555538 145 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC012414.6-201ENST00000568241 401 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC141257.3-201ENST00000572906 215 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AP001004.1-201ENST00000582468 324 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC131238.1-201ENST00000617135 328 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC009318.4-201ENST00000620496 486 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 AC140113.4-201ENST00000622087 222 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 CYP3A51P-201ENST00000633513 256 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 MIR492-201ENST00000638676 116 ntBASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.33□□□□□ -1.72
TBC1D3FA6NER0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LINC01109-201ENST00000603837 3081 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AL022578.1-201ENST00000439330 1433 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 U3.4-201ENST00000363352 213 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AL583835.1-201ENST00000399570 407 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC097374.1-203ENST00000400783 485 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TBC1D3FA6NER0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms