Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC110774.1-201ENST00000623567 2018 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 AC000403.1-201ENST00000613696 3585 ntBASIC2.55□□□□□ -2
TRAV27A0A087WT01 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 AL136164.4-201ENST00000625013 2135 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 OR52E6-202ENST00000379946 954 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 RNU6-356P-201ENST00000384140 107 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 MIR607-201ENST00000385241 96 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 MIR320B1-201ENST00000390209 79 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 RNA5SP171-201ENST00000391071 115 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 SNORA48.7-201ENST00000391302 135 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 SNORA11C-201ENST00000408532 129 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 OR2B8P-201ENST00000432841 938 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 HMGB1P45-201ENST00000435986 653 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 HMGN2P20-201ENST00000437531 273 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 AL671855.1-201ENST00000446875 1203 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 HMGB1P5-202ENST00000451497 985 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 HMGN2P16-201ENST00000456802 261 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AC006483.1-201ENST00000487308 313 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AP001960.1-201ENST00000506494 658 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 RNA5SP76-201ENST00000516277 87 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AL133271.1-201ENST00000538229 291 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 AL121603.1-201ENST00000553815 142 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 H3F3AP1-201ENST00000559984 334 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 AC012493.2-201ENST00000595083 291 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AC125494.3-201ENST00000602759 455 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AP003117.1-201ENST00000602771 554 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AC069234.5-201ENST00000611056 416 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 MIR6798-201ENST00000612887 67 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.54□□□□□ -2
TRAV27A0A087WT01 MIR6733-201ENST00000635723 61 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 AC009487.2-201ENST00000420969 6821 ntBASIC2.54□□□□□ -2
TRAV27A0A087WT01 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRAV27A0A087WT01 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRAV27A0A087WT01 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 MTND4P34-201ENST00000572715 1371 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 RNA5SP344-201ENST00000411081 104 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC007563.3-201ENST00000433233 371 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 RPL37P6-202ENST00000464216 403 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 RPL23AP11-201ENST00000475260 469 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC126121.1-201ENST00000482313 553 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 RPL30P11-201ENST00000495304 339 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAV27A0A087WT01 TMEM248P1-201ENST00000510579 951 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC091826.1-201ENST00000514065 313 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 RNU4-60P-201ENST00000517239 135 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC022884.3-201ENST00000579571 248 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 MIR3690-201ENST00000580266 75 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC023043.3-201ENST00000593113 385 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC091488.1-201ENST00000604239 660 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC004832.5-201ENST00000608677 401 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 AL391834.1-201ENST00000609609 560 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 CYCSP41-201ENST00000616920 296 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TRAV27A0A087WT01 AC022079.2-201ENST00000619739 566 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 FRG1DP-201ENST00000635586 771 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRAV27A0A087WT01 MTND5P3-201ENST00000438536 1800 ntBASIC2.53□□□□□ -2
TRAV27A0A087WT01 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
TRAV27A0A087WT01 AC117529.2-201ENST00000512159 2068 ntBASIC2.53□□□□□ -2.01
TRAV27A0A087WT01 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 AL512633.1-201ENST00000399931 655 ntBASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 AL138885.1-201ENST00000405921 675 ntBASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 RN7SKP27-201ENST00000410684 333 ntBASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 LINC01881-201ENST00000416103 412 ntBASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 RPS20P5-201ENST00000434808 360 ntBASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 AL513043.1-201ENST00000439124 535 ntBASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.52□□□□□ -2.01
TRAV27A0A087WT01 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 271.8 ms