Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 HMGB1P50-201ENST00000605814 607 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AP003117.2-201ENST00000606010 545 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC245008.1-201ENST00000608123 476 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AL451074.6-201ENST00000608512 729 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC084782.3-201ENST00000612282 578 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 MTND5P31-201ENST00000419366 1374 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AP000526.1-201ENST00000603308 1388 ntBASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX9Q9Y5X1 AP002001.2-201ENST00000529025 1469 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AL513185.3-201ENST00000433335 1300 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 ZNF962P-201ENST00000443465 3140 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 SGO1P2-201ENST00000429458 1589 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 MIR124-3-201ENST00000384866 87 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 SNORA3C-201ENST00000408792 125 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 RPL7AP73-201ENST00000413490 353 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AL161449.1-201ENST00000414531 1199 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AL365203.2-201ENST00000423444 196 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 USP9YP31-201ENST00000431405 881 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 SEPT7P5-201ENST00000434048 306 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 YWHAZP7-201ENST00000436906 631 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 MTCO3P28-201ENST00000513351 515 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 RN7SKP31-201ENST00000516354 278 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC087808.1-201ENST00000520501 361 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC005832.3-201ENST00000537929 631 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 MIR4999-201ENST00000585029 91 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC005255.1-201ENST00000593748 216 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC020914.4-201ENST00000597690 277 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC015726.1-201ENST00000602353 681 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC121247.2-201ENST00000604776 136 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AL451064.1-201ENST00000607718 471 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 AC103858.2-201ENST00000621471 543 ntBASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNX9Q9Y5X1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 MTCO1P14-201ENST00000441695 1559 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 RNU6-839P-201ENST00000363347 108 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 RNU6-213P-201ENST00000384051 104 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AL138878.1-201ENST00000405131 347 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 MIR1302-8-201ENST00000408342 128 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 RPL31P45-201ENST00000419532 356 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AP000926.1-201ENST00000479573 241 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC108734.3-201ENST00000481241 1165 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 VPS26AP1-201ENST00000483197 979 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC012170.1-201ENST00000495139 359 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC110792.2-201ENST00000510278 224 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC079395.1-201ENST00000510981 262 ntBASIC4.23□□□□□ -1.73
SNX9Q9Y5X1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms