Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MTCO1P49-201ENST00000523429 802 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC084824.1-201ENST00000550917 1005 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC004217.3-201ENST00000551552 878 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC112503.2-201ENST00000609005 552 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL450489.1-201ENST00000612071 468 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AC024941.1-201ENST00000612250 334 ntBASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDD3Q9Y3P4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 SNORD3H-201ENST00000384486 214 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 RN7SKP285-201ENST00000410137 318 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-77P-201ENST00000410554 91 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 MORF4L1P7-201ENST00000426038 703 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AL158071.1-201ENST00000430315 461 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC104308.1-201ENST00000454621 333 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC010401.1-201ENST00000463867 348 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC068587.1-201ENST00000483613 781 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AP001636.2-201ENST00000525517 696 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC026333.2-201ENST00000542164 106 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 OR4T1P-201ENST00000554933 911 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 TGIF1P1-201ENST00000558095 802 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 SNORD84-203ENST00000584275 78 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 BNIP3P4-201ENST00000604946 565 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AL451074.6-201ENST00000608512 729 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC104307.1-201ENST00000616142 196 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AC068831.7-201ENST00000616954 363 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 ZNF542P-204ENST00000482727 1305 ntBASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
RHBDD3Q9Y3P4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNA5SP479-201ENST00000364858 117 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 MIR649-201ENST00000384843 97 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-821P-201ENST00000390995 107 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 MIR1193-201ENST00000408109 78 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-55P-201ENST00000411092 107 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-954P-201ENST00000411355 107 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC109780.2-201ENST00000413467 845 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 MTND4LP7-201ENST00000431728 294 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RPS15AP29-201ENST00000445539 400 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RPL36AP33-201ENST00000450395 310 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RPL12P26-201ENST00000452430 487 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RPS23P3-201ENST00000470993 430 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC017015.1-201ENST00000477387 286 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC006483.1-201ENST00000487308 313 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 MIR2276-201ENST00000516886 89 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 RNU6-711P-201ENST00000517255 106 ntBASIC3.09□□□□□ -1.91
RHBDD3Q9Y3P4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms