Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.22□□□□□ -1.89
COPS3Q9UNS2 AP000553.6-201ENST00000641242 118 ntBASIC3.22□□□□□ -1.89
COPS3Q9UNS2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COPS3Q9UNS2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COPS3Q9UNS2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC118273.1-201ENST00000525324 3006 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 OR4A15-201ENST00000314706 1035 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNU6-989P-201ENST00000362756 107 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNU6-582P-201ENST00000362989 107 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 SNORD116-23-201ENST00000384645 92 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNA5SP293-201ENST00000410527 113 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNU4-78P-201ENST00000410940 126 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RPS7P13-201ENST00000413955 498 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 FCF1P2-201ENST00000415284 583 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AL035410.1-201ENST00000427409 427 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 OR4C10P-201ENST00000434991 931 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 COX6CP18-201ENST00000448769 222 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 NDUFA5P7-201ENST00000452914 242 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC110768.1-201ENST00000509222 400 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC005921.1-201ENST00000510589 286 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNU2-58P-201ENST00000516403 183 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RN7SKP244-201ENST00000516513 307 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 MTCYBP41-201ENST00000528913 1123 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 OR4A45P-201ENST00000529954 901 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 OR8K4P-201ENST00000534608 872 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 OR4H12P-201ENST00000556269 907 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC136624.4-201ENST00000573044 370 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC090616.5-202ENST00000582111 297 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 MIR4697-201ENST00000582977 78 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC113368.1-201ENST00000603736 382 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AL590392.1-201ENST00000604960 446 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC099785.1-201ENST00000605697 437 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 SNORA51-201ENST00000606420 132 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 RNU1-30P-201ENST00000606575 163 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 VN1R74P-201ENST00000613259 503 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC090116.1-201ENST00000615679 446 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 U73479.1-201ENST00000618062 168 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC253576.2-201ENST00000618815 580 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 AC111188.2-201ENST00000529697 1387 ntBASIC3.21□□□□□ -1.9
COPS3Q9UNS2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COPS3Q9UNS2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AL355578.1-201ENST00000607405 1328 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 ZNF734P-201ENST00000419494 1534 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RNU6-335P-201ENST00000364563 113 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RNA5SP283-201ENST00000365604 119 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RNU6-339P-201ENST00000384310 107 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RNU6-549P-201ENST00000384433 107 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 MIR30B-201ENST00000384850 88 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AL024507.1-201ENST00000412741 274 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AL136133.1-201ENST00000413694 376 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 MTND2P16-201ENST00000419987 799 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 SDCBPP2-201ENST00000424643 885 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 OSTCP5-201ENST00000425293 453 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AC013262.1-201ENST00000426710 252 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 MTCYBP32-201ENST00000427945 1084 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AL158071.1-201ENST00000430315 461 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 RPL23AP69-201ENST00000431134 458 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 HSFY6P-201ENST00000445573 403 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AC244505.3-201ENST00000454598 187 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 snoU13.3-201ENST00000459441 104 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 SYPL1P1-201ENST00000473622 768 ntBASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.2□□□□□ -1.9
COPS3Q9UNS2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms