Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MTND5P28-201ENST00000438005 1594 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC107081.3-201ENST00000612715 2034 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 MTND4LP20-201ENST00000402379 270 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 RSL24D1P1-201ENST00000404972 493 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 RNA5SP80-201ENST00000410475 111 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC004987.3-201ENST00000413879 771 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 NUP35P2-201ENST00000416748 943 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 Z75741.1-201ENST00000446793 314 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC011825.1-201ENST00000484967 388 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC079203.1-201ENST00000487972 404 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AL583856.2-201ENST00000606298 543 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC105227.2-201ENST00000615075 605 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC006213.4-201ENST00000616184 634 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 ZNF33CP-201ENST00000432492 2030 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 SNORD17-201ENST00000390930 237 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 DSTNP4-201ENST00000399472 474 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC107083.1-201ENST00000439643 279 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 MTCYBP42-201ENST00000444653 1130 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 TMED11P-201ENST00000479478 690 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 OR8K4P-201ENST00000534608 872 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 MIR5680-201ENST00000577577 84 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC006023.1-201ENST00000603944 259 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AL033523.1-201ENST00000605153 153 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 AC091905.1-201ENST00000624400 311 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 MIR6715B-201ENST00000637172 77 ntBASIC6.79□□□□□ -1.32
SHROOM4Q9ULL8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 RHOT1P2-201ENST00000366423 333 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 BTBD10P2-201ENST00000404779 676 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AC080014.1-201ENST00000496877 1201 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AP001207.1-201ENST00000524051 481 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 OR1AB1P-201ENST00000585564 761 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AC010680.4-201ENST00000605334 543 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 AL713922.2-201ENST00000619384 716 ntBASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM4Q9ULL8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AC010881.1-201ENST00000433830 235 ntBASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 PPIAP17-201ENST00000438507 471 ntBASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AL671855.1-201ENST00000446875 1203 ntBASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AC011611.1-201ENST00000552179 197 ntBASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AC044913.1-201ENST00000557200 430 ntBASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 MIR4496-201ENST00000635896 61 ntBASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM4Q9ULL8 AL645568.2-201ENST00000432815 1337 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 SNORA80A-201ENST00000363922 136 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 RNU6-1293P-201ENST00000384077 107 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 RNU6-301P-201ENST00000384277 107 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 BX323014.1-201ENST00000412876 237 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 YWHAZP8-201ENST00000436935 731 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 RPS26P56-201ENST00000444468 240 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 RPL7P59-201ENST00000447700 943 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC006480.1-201ENST00000449887 378 ntBASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.76□□□□□ -1.33
SHROOM4Q9ULL8 AC011352.3-201ENST00000505162 593 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms