Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RNU6-582P-201ENST00000362989 107 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RNU1-64P-201ENST00000365443 163 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 MIR92A2-201ENST00000385299 75 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 SOD2P1-201ENST00000396543 562 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RNU2-42P-201ENST00000410697 113 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 CYCSP19-201ENST00000411715 316 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AL160275.2-201ENST00000412010 394 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RPL17P36-201ENST00000420302 549 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 PPIAP17-201ENST00000438507 471 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AL353748.1-201ENST00000440753 474 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC118469.1-201ENST00000442943 488 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AL606662.1-201ENST00000445763 553 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 MTCO2P25-201ENST00000447065 681 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 NANOGP10-201ENST00000453325 895 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 PNPLA4P1-201ENST00000458328 305 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RPS20P21-201ENST00000466859 343 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 HSPE1P23-201ENST00000509838 286 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RAC1P2-201ENST00000511164 579 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC109445.1-201ENST00000512356 383 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RNA5SP135-201ENST00000517019 125 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC090877.1-201ENST00000561418 344 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 MIR4999-201ENST00000585029 91 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC006130.2-201ENST00000586202 326 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 VN1R82P-201ENST00000601481 356 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC006539.2-201ENST00000601729 572 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AL020997.2-201ENST00000602607 184 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC008638.3-201ENST00000603341 463 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC124312.4-201ENST00000605533 310 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 OR6R2P-201ENST00000609216 300 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC026368.1-201ENST00000614934 690 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 IPO8P1-201ENST00000455509 3109 ntBASIC4.13□□□□□ -1.75
SIX4Q9UIU6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SIX4Q9UIU6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RNU6-553P-201ENST00000364047 96 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RNU5A-2P-201ENST00000384337 116 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 U8.11-201ENST00000384699 133 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 U8.12-201ENST00000384701 133 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL021407.1-201ENST00000404531 386 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL445189.1-201ENST00000405722 338 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL139098.1-201ENST00000407291 389 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 SNORA3.3-201ENST00000408712 125 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RNU6-272P-201ENST00000411028 104 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 MORF4L1P6-201ENST00000418771 268 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AC096638.2-201ENST00000434965 711 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 THAP5P1-201ENST00000439089 262 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL591503.2-201ENST00000442314 1005 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RAB11AP1-201ENST00000442978 646 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL359073.1-201ENST00000448036 403 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 TPMTP4-201ENST00000450749 678 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 RPL12P26-201ENST00000452430 487 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AC073387.1-201ENST00000453261 709 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX4Q9UIU6 UBDP1-202ENST00000457888 382 ntBASIC4.12□□□□□ -1.75
SIX4Q9UIU6 U8.18-201ENST00000459285 133 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms