Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 ELF2P3-201ENST00000445099 1506 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RNA5SP191-201ENST00000362585 102 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 SNORA51.8-201ENST00000384234 132 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RNA5SP372-201ENST00000390836 115 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 SNORA40.3-201ENST00000390964 122 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC109780.2-201ENST00000413467 845 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 HMGB1P11-201ENST00000413899 637 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AIMP1P1-201ENST00000418670 937 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 BX510359.3-201ENST00000422168 306 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AL356583.2-201ENST00000426536 280 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 NPM1P34-201ENST00000428821 893 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 GDI2P2-201ENST00000445131 608 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 H2AFZP5-201ENST00000446960 382 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 VN1R34P-201ENST00000447387 883 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 HMGN3P1-201ENST00000453847 193 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RPL7AP28-201ENST00000464513 571 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC108941.1-201ENST00000502853 530 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 KRT19P6-201ENST00000510983 209 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC022483.1-201ENST00000514020 567 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RNU6-202P-201ENST00000515998 96 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RNA5SP216-201ENST00000516111 123 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 EDDM3DP-201ENST00000554692 434 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 MIR3913-1-201ENST00000577744 102 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RN7SL652P-201ENST00000577769 300 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 SNORA59B-202ENST00000578183 701 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 RN7SL753P-201ENST00000581238 290 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC209154.1-201ENST00000582156 337 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC008966.2-201ENST00000606157 453 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC131902.3-201ENST00000611767 581 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC067931.1-201ENST00000624190 671 ntBASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SH3BP4Q9P0V3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 RNU1-94P-201ENST00000362627 173 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 Y_RNA.256-201ENST00000364594 104 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 RNU5A-6P-201ENST00000384136 116 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 MIR195-201ENST00000385194 87 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 MIR921-201ENST00000401133 56 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 COX6B1P1-201ENST00000415962 213 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC009480.2-201ENST00000422916 432 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 Z74021.1-201ENST00000423610 407 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC008065.1-201ENST00000428525 348 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 NRBF2P3-201ENST00000432731 865 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 RPS26P56-201ENST00000444468 240 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 WASF1P1-201ENST00000447560 1131 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 RPL23AP15-201ENST00000450202 459 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 RPS20P21-201ENST00000466859 343 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC118273.2-201ENST00000532092 465 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 OR6C73P-201ENST00000546432 358 ntBASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.41□□□□□ -1.7
SH3BP4Q9P0V3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms