Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 NDUFA5P9-201ENST00000472609 340 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RPS27AP13-201ENST00000498403 237 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AK3P4-201ENST00000504283 583 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC093534.1-201ENST00000504977 132 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC110768.1-201ENST00000509222 400 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC008885.2-201ENST00000509506 930 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC048346.1-201ENST00000510247 144 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 FABP5P12-201ENST00000515543 389 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RAB9BP1-201ENST00000519581 626 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 YPEL5P3-201ENST00000547227 352 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AL121766.1-201ENST00000547436 487 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 PSMB7P1-201ENST00000556349 514 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC009094.1-201ENST00000564443 426 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC009712.1-201ENST00000564938 316 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC008687.2-201ENST00000597865 520 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC091167.4-201ENST00000605079 184 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC092954.1-201ENST00000609121 445 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 MIR378J-201ENST00000611988 109 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC092628.2-201ENST00000622492 339 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AP003485.2-201ENST00000623636 610 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC068057.2-201ENST00000624047 895 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 MTND2P41-201ENST00000637599 773 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 DCAF13P1-201ENST00000495256 1330 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC079741.1-201ENST00000321498 212 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 MIR383-201ENST00000362257 73 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 RNA5SP167-201ENST00000365461 116 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AP002088.1-201ENST00000382740 395 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 Y_RNA.408-201ENST00000383987 102 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 U1.1-201ENST00000384101 164 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 Y_RNA.465-201ENST00000384293 102 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 MTCO3P31-201ENST00000405526 789 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 RNU2-65P-201ENST00000410162 185 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AL161449.1-201ENST00000414531 1199 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC007435.1-201ENST00000421086 415 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 SEPT7P5-201ENST00000434048 306 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 RPS23P7-201ENST00000466210 444 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC087312.1-201ENST00000471411 480 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC004263.1-201ENST00000479327 332 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC108475.1-201ENST00000507880 950 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC093755.1-201ENST00000512950 1023 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AP001636.2-201ENST00000525517 696 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC067852.4-201ENST00000590314 478 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC069304.3-201ENST00000603938 1084 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AP003973.1-201ENST00000604639 691 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AL450489.1-201ENST00000612071 468 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC123768.4-201ENST00000616244 701 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms