Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP001180.3-201ENST00000582221 145 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC091979.2-201ENST00000607514 214 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AL513477.2-201ENST00000607858 568 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC138932.5-201ENST00000617759 563 ntBASIC5.14□□□□□ -1.59
VTA1Q9NP79 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.14□□□□□ -1.59
VTA1Q9NP79 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VTA1Q9NP79 TEX21P-201ENST00000447107 1476 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AL391684.1-202ENST00000641293 1636 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 Y_RNA.97-201ENST00000363094 102 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 RNU6-878P-201ENST00000384578 110 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 RNU6-952P-201ENST00000391164 108 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 MIR1193-201ENST00000408109 78 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AF274854.1-201ENST00000413236 615 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC011933.1-201ENST00000413334 321 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC012065.2-201ENST00000421295 375 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 RPS12P10-201ENST00000427031 377 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 RPS3AP54-201ENST00000435535 734 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC104651.2-201ENST00000447549 528 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 BTF3P6-201ENST00000448054 499 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 snoU109.1-201ENST00000459339 135 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC116533.1-201ENST00000459748 321 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 DUXAP2-201ENST00000519198 589 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AP002453.2-201ENST00000533503 320 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC022880.1-201ENST00000534017 973 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC010546.1-201ENST00000569391 485 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC053481.3-201ENST00000577881 843 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 Z99129.1-201ENST00000612510 255 ntBASIC5.13□□□□□ -1.59
VTA1Q9NP79 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.13□□□□□ -1.59
VTA1Q9NP79 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VTA1Q9NP79 AC092447.7-201ENST00000422212 1621 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AL359922.3-201ENST00000624779 1670 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 U8.14-201ENST00000390843 143 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AL359643.1-201ENST00000404109 423 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 Y_RNA.598-201ENST00000410480 95 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 ELOCP17-201ENST00000414751 326 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 OR5BE1P-201ENST00000425977 939 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC008065.1-201ENST00000428525 348 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AL033528.1-201ENST00000453780 140 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC087312.1-201ENST00000471411 480 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 LARP1BP2-201ENST00000486594 519 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.12□□□□□ -1.59
VTA1Q9NP79 KCTD9P2-201ENST00000512203 1013 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 PAICSP4-201ENST00000517543 1253 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 MTND1P5-201ENST00000517906 940 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AL139174.1-201ENST00000531489 886 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC013828.2-201ENST00000532487 235 ntBASIC5.12□□□□□ -1.59
VTA1Q9NP79 AC092470.1-201ENST00000546187 132 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms