Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AP002802.2-201ENST00000605877 235 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 RNU1-30P-201ENST00000606575 163 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AL513477.2-201ENST00000607858 568 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AC124016.2-201ENST00000610058 665 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AC090116.1-201ENST00000615679 446 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AP002371.2-201ENST00000624450 503 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AC080188.3-201ENST00000624842 748 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 MIR7153-201ENST00000637758 57 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX47Q9H0S4 PWAR6-201ENST00000552334 4618 ntBASIC3.72□□□□□ -1.81
DDX47Q9H0S4 AC130650.2-201ENST00000618736 2403 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 RNA5SP189-201ENST00000364920 115 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 MIR217-201ENST00000384817 110 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 EIF5P1-201ENST00000400019 1231 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 RPL17P36-201ENST00000420302 549 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 OR8F1P-201ENST00000425243 930 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AL591419.1-201ENST00000427423 339 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC005345.1-201ENST00000431868 217 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 NUTF2P7-201ENST00000453086 375 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC006539.3-201ENST00000454258 129 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AL049829.1-201ENST00000465411 156 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 RNU2-27P-201ENST00000516185 142 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 OR8I1P-201ENST00000529291 931 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 OR5D17P-201ENST00000531492 978 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 DUXAP6-201ENST00000553858 601 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC044913.1-201ENST00000557200 430 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AGGF1P6-201ENST00000569213 976 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 MIR3186-201ENST00000577404 85 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AL669831.4-202ENST00000590817 238 ntBASIC3.71□□□□□ -1.82
DDX47Q9H0S4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
DDX47Q9H0S4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC010733.2-201ENST00000589496 5702 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 RNU6-251P-201ENST00000363235 104 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 RNU6-236P-201ENST00000363886 106 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 SNORA7.2-201ENST00000364446 145 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AL136133.1-201ENST00000413694 376 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 BTF3P8-201ENST00000414577 526 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 HMGB3P5-201ENST00000428894 612 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AL117339.2-201ENST00000430475 180 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 HSFY6P-201ENST00000445573 403 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 MRPL42P4-201ENST00000453267 443 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 RPL6P9-201ENST00000466502 859 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AP000563.1-201ENST00000490865 758 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 RN7SKP21-201ENST00000516503 220 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 MIR2276-201ENST00000516886 89 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 MTND2P7-201ENST00000521337 640 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC104417.1-201ENST00000523974 751 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC019227.1-201ENST00000526902 510 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 LSM6P2-201ENST00000552208 177 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC093519.1-201ENST00000566109 298 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC122134.1-202ENST00000569111 1201 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX47Q9H0S4 AC018754.1-201ENST00000607486 925 ntBASIC3.7□□□□□ -1.82
DDX47Q9H0S4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms