Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL031679.1-201ENST00000400616 525 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 DHFRP6-201ENST00000401776 268 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 MTCYBP10-201ENST00000424905 650 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC006548.1-201ENST00000427470 102 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC137499.1-201ENST00000427602 88 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 CFL1P1-202ENST00000432948 411 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC099670.2-201ENST00000435130 321 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 CECR9-201ENST00000453421 199 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AL645937.3-201ENST00000453647 936 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RPS15AP1-201ENST00000457423 391 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC006512.1-201ENST00000468816 291 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RPS26P39-201ENST00000469206 341 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RN7SL177P-201ENST00000476596 299 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RN7SL447P-201ENST00000494711 245 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC024558.1-201ENST00000505008 528 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNU6-488P-201ENST00000515918 99 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 RNU6-1220P-201ENST00000517126 108 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC017100.2-201ENST00000584628 355 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 VN1R84P-201ENST00000593697 235 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC006363.1-201ENST00000603806 463 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AL512624.1-201ENST00000613638 469 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 U4.1-201ENST00000620349 87 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC099494.2-201ENST00000623371 978 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC244517.12-201ENST00000623581 663 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 CR381572.1-201ENST00000625098 102 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 AC020633.1-201ENST00000468439 2247 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 USP9YP4-201ENST00000424401 1745 ntBASIC4.58□□□□□ -1.68
SSBP3Q9BWW4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 Y_RNA.373-201ENST00000365600 103 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AL359634.1-202ENST00000404721 284 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RPL31P52-201ENST00000407532 367 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RNU6-193P-201ENST00000410977 107 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RNU6-847P-201ENST00000411115 108 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RNU2-6P-201ENST00000411404 190 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AL355433.1-201ENST00000422804 300 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC138761.5-201ENST00000433967 325 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 CYCSP6-201ENST00000434498 302 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 HMGB3P10-201ENST00000434734 572 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RPL12P18-201ENST00000437175 325 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 CYCSP12-201ENST00000437729 300 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC105399.1-202ENST00000447303 205 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AP1S2P1-201ENST00000457344 379 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RPS4XP10-201ENST00000465034 731 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 GMFBP1-201ENST00000467831 427 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC083904.1-201ENST00000487828 231 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 SUMO2P4-201ENST00000504193 276 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 PTP4A1P4-201ENST00000512479 322 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC114797.1-201ENST00000514003 728 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 SMURF2P1-201ENST00000514992 481 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 RNU6-202P-201ENST00000515998 96 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 SCARNA16.4-201ENST00000516956 187 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 AC107934.1-201ENST00000522215 217 ntBASIC4.57□□□□□ -1.68
SSBP3Q9BWW4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms