Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RPL30P2-201ENST00000414021 291 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 AC006960.1-201ENST00000419980 153 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 RPS6P12-201ENST00000432491 726 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.6□□□□□ -1.83
ABCA3Q99758 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ABCA3Q99758 AC008716.1-201ENST00000511084 513 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 AC096725.1-201ENST00000514266 313 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.6□□□□□ -1.83
ABCA3Q99758 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.6□□□□□ -1.83
ABCA3Q99758 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ABCA3Q99758 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.6□□□□□ -1.83
ABCA3Q99758 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ABCA3Q99758 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ABCA3Q99758 AL450326.2-201ENST00000421913 1962 ntBASIC3.6□□□□□ -1.83
ABCA3Q99758 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ABCA3Q99758 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ABCA3Q99758 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.6□□□□□ -1.83
ABCA3Q99758 RNU1-35P-201ENST00000362782 153 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 Y_RNA.238-201ENST00000364441 102 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 MIR1289-2-201ENST00000408360 111 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 RNA5SP274-201ENST00000410484 108 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 AL137014.1-201ENST00000420490 1226 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 FCF1P1-201ENST00000432690 571 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 B3GNT2P1-201ENST00000434960 952 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.59□□□□□ -1.83
ABCA3Q99758 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.59□□□□□ -1.83
ABCA3Q99758 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ABCA3Q99758 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
ABCA3Q99758 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
ABCA3Q99758 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.59□□□□□ -1.84
ABCA3Q99758 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
ABCA3Q99758 MIR26A1-201ENST00000362205 77 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 MIR365B-201ENST00000362317 111 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 OR51A3P-201ENST00000413596 924 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 AC245054.2-201ENST00000415639 319 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC127526.1-201ENST00000417526 366 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC112220.1-201ENST00000434628 355 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCA3Q99758 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCA3Q99758 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCA3Q99758 MIR6715B-201ENST00000637172 77 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
ABCA3Q99758 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
ABCA3Q99758 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
ABCA3Q99758 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ABCA3Q99758 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.58□□□□□ -1.84
ABCA3Q99758 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ABCA3Q99758 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ABCA3Q99758 YPEL5P1-201ENST00000419731 367 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 OR2AS1P-201ENST00000427827 319 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCA3Q99758 RPL23AP31-201ENST00000456160 467 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.58□□□□□ -1.84
ABCA3Q99758 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.58□□□□□ -1.84
ABCA3Q99758 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.58□□□□□ -1.84
ABCA3Q99758 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.58□□□□□ -1.84
ABCA3Q99758 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.57□□□□□ -1.84
ABCA3Q99758 AC026523.2-201ENST00000625039 7739 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 U3.11-201ENST00000364476 212 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ABCA3Q99758 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCA3Q99758 RPS7P13-201ENST00000413955 498 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 GTF2IP23-201ENST00000423746 351 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 AC078785.3-201ENST00000476607 425 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.57□□□□□ -1.84
ABCA3Q99758 PDCD5P1-201ENST00000543528 309 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.57□□□□□ -1.84
ABCA3Q99758 AC110741.2-201ENST00000605278 268 ntBASIC3.57□□□□□ -1.84
ABCA3Q99758 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ABCA3Q99758 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ABCA3Q99758 ZNF72P-201ENST00000425869 1908 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ABCA3Q99758 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCA3Q99758 RNU6-618P-201ENST00000363518 112 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 MIR137-201ENST00000385223 102 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.56□□□□□ -1.84
ABCA3Q99758 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.56□□□□□ -1.84
ABCA3Q99758 VN1R48P-201ENST00000448149 1036 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 AC006539.3-201ENST00000454258 129 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 AC106872.2-201ENST00000494303 480 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
ABCA3Q99758 HMGB3P26-201ENST00000560051 582 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
ABCA3Q99758 OR4G1P-202ENST00000641173 1788 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 AC016717.2-201ENST00000609089 5141 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCA3Q99758 OR11H5P-202ENST00000641612 1325 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 SPATA2P1-201ENST00000431223 2055 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 RN7SKP44-201ENST00000363602 316 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 AL138878.1-201ENST00000405131 347 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms