Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL713922.2-201ENST00000619384 716 ntBASIC4.09□□□□□ -1.75
PKP4Q99569 AL359715.5-201ENST00000623431 443 ntBASIC4.09□□□□□ -1.75
PKP4Q99569 AF246928.1-201ENST00000623768 87 ntBASIC4.09□□□□□ -1.75
PKP4Q99569 MIR3653-201ENST00000625572 110 ntBASIC4.09□□□□□ -1.75
PKP4Q99569 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PKP4Q99569 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.09□□□□□ -1.75
PKP4Q99569 PABPC1P7-201ENST00000413177 1513 ntBASIC4.09□□□□□ -1.75
PKP4Q99569 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.09□□□□□ -1.75
PKP4Q99569 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
PKP4Q99569 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.76
PKP4Q99569 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PKP4Q99569 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PKP4Q99569 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 RNA5SP52-201ENST00000362448 134 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 TAF9BP1-201ENST00000396646 746 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 MIR1250-201ENST00000408098 113 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.08□□□□□ -1.76
PKP4Q99569 RNU6-575P-201ENST00000411326 105 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 RAB28P1-201ENST00000411517 641 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AL160275.2-201ENST00000412010 394 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 RPS3AP9-201ENST00000417027 792 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC007435.1-201ENST00000421086 415 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.08□□□□□ -1.76
PKP4Q99569 GTF2IP23-201ENST00000423746 351 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 DLGAP5P1-201ENST00000430307 464 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 COX6B1P7-201ENST00000430845 235 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 MARK2P15-201ENST00000432204 2186 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 ATP5F1P1-201ENST00000433775 569 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 HMGB1P45-201ENST00000435986 653 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 HMGB1P16-201ENST00000447155 540 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC079776.3-201ENST00000450665 370 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC109327.1-201ENST00000471666 403 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 UQCRHP4-201ENST00000471686 272 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC087879.1-201ENST00000474343 374 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC105137.1-201ENST00000484355 562 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 WBP1LP4-201ENST00000505043 344 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 MTCO2P32-201ENST00000514865 403 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 HIGD1AP3-201ENST00000515857 278 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC105233.3-201ENST00000531125 744 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC007115.1-201ENST00000546853 234 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC004217.3-201ENST00000551552 878 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC063950.1-201ENST00000552036 308 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 NIFKP8-201ENST00000560500 874 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 EIF5A2P1-201ENST00000564027 460 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 KPNA2P3-201ENST00000584190 848 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 AC007566.2-201ENST00000603642 413 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 ARF4P1-201ENST00000605447 541 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 AL451074.6-201ENST00000608512 729 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AP005137.2-201ENST00000609238 400 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC073114.1-201ENST00000612027 490 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.08□□□□□ -1.76
PKP4Q99569 AC007494.3-201ENST00000624660 743 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 AC084035.1-201ENST00000634543 607 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKP4Q99569 Z82217.1-201ENST00000625157 8149 ntBASIC4.08□□□□□ -1.76
PKP4Q99569 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.08□□□□□ -1.76
PKP4Q99569 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 AC087359.1-201ENST00000508335 1740 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.07□□□□□ -1.76
PKP4Q99569 CR381670.1-201ENST00000624291 1693 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms