Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 RNA5SP289-201ENST00000362332 137 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 ELOCP10-201ENST00000440624 327 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 RPL29P29-201ENST00000448725 423 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC128713.1-201ENST00000471495 306 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AP004217.1-201ENST00000480579 346 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC078817.1-201ENST00000492623 435 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC111000.2-201ENST00000507775 550 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 ELOCP34-201ENST00000604436 327 ntBASIC3.28□□□□□ -1.88
CDK5RAP2Q96SN8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
CDK5RAP2Q96SN8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC104446.1-201ENST00000613728 1321 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC073069.1-201ENST00000428657 441 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 B3GNT2P1-201ENST00000434960 952 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC009969.1-201ENST00000438726 172 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 RPL7L1P13-201ENST00000511702 739 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 HIGD1AP10-201ENST00000527837 282 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC104763.2-201ENST00000604179 382 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC138393.1-206ENST00000540997 1886 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.27□□□□□ -1.89
CDK5RAP2Q96SN8 SNORA67.4-201ENST00000384688 142 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC013268.2-201ENST00000420753 337 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AP000936.2-201ENST00000447151 681 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC093278.1-201ENST00000494700 600 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 RNA5SP282-201ENST00000516355 108 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC123786.2-201ENST00000603459 275 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AL136964.1-201ENST00000622038 2990 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AP006248.2-201ENST00000623309 592 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC010149.2-201ENST00000637608 315 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AL353743.4-201ENST00000422653 1547 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 PWAR6-201ENST00000552334 4618 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 XIAPP3-201ENST00000312918 795 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AL139413.1-201ENST00000421309 217 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 RPL7P36-201ENST00000444633 681 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC016687.1-201ENST00000482574 353 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC005046.1-201ENST00000608515 625 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 AC000123.2-201ENST00000623124 461 ntBASIC3.26□□□□□ -1.89
CDK5RAP2Q96SN8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CDK5RAP2Q96SN8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 SLC31A1P1-201ENST00000451221 567 ntBASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 AC005921.1-201ENST00000510589 286 ntBASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 SNORD116-26-201ENST00000516006 96 ntBASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 RNU1-41P-201ENST00000516161 162 ntBASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 RNU1-48P-201ENST00000516400 162 ntBASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 FAM60DP-201ENST00000524174 632 ntBASIC3.24□□□□□ -1.89
CDK5RAP2Q96SN8 AC107016.2-201ENST00000547968 190 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms