Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AL645931.1-201ENST00000439737 410 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 VN1R10P-201ENST00000447106 875 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC114755.5-201ENST00000447760 831 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC092757.1-201ENST00000467293 467 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VMP1Q96GC9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC010625.1-201ENST00000511296 403 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC010265.1-201ENST00000513509 211 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 RNA5SP143-201ENST00000516936 115 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 NARSP2-201ENST00000518524 679 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 DEFB130C-202ENST00000530001 230 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 SNRPGP16-201ENST00000533275 226 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 AC006116.5-201ENST00000591936 559 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 RPL23AP92-201ENST00000603609 255 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AP001521.1-201ENST00000609150 300 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 RNU6-1192P-201ENST00000612197 107 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 AL110115.1-201ENST00000614396 364 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 RNU6-489P-201ENST00000618289 107 ntBASIC3.92□□□□□ -1.78
VMP1Q96GC9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VMP1Q96GC9 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.92□□□□□ -1.78
VMP1Q96GC9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VMP1Q96GC9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 MAPK10-362ENST00000641864 4484 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 RN7SKP227-201ENST00000364445 330 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 SNORD51-201ENST00000384320 80 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 RNU6-878P-201ENST00000384578 110 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 CYCSP45-201ENST00000402289 315 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AL022722.2-201ENST00000402519 180 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 HMGB3P23-201ENST00000414981 585 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC108032.1-201ENST00000416706 207 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC079780.1-201ENST00000428259 207 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 SGO1P2-201ENST00000429458 1589 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 OR9M1P-201ENST00000459641 921 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 RPS23P3-201ENST00000470993 430 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 BNIP3P41-201ENST00000503774 571 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC010460.2-201ENST00000509054 677 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC026412.2-201ENST00000512270 1075 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 RNU6-1028P-201ENST00000517164 93 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC025884.1-201ENST00000556034 378 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AP001330.4-201ENST00000604350 154 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 Z82195.1-201ENST00000604558 398 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AL391497.1-201ENST00000608671 547 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC015967.1-201ENST00000619893 476 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 U7.8-201ENST00000619968 63 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC092326.2-201ENST00000624772 1561 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AP003485.1-201ENST00000625093 753 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.91□□□□□ -1.78
VMP1Q96GC9 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 ZNF826P-207ENST00000622273 1910 ntBASIC3.91□□□□□ -1.78
VMP1Q96GC9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VMP1Q96GC9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
VMP1Q96GC9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.9□□□□□ -1.78
VMP1Q96GC9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AL121657.1-201ENST00000327215 531 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms