Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AL935212.3-201ENST00000450729 284 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 LARP1BP2-201ENST00000486594 519 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 RPS27P23-201ENST00000487608 251 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC008628.2-201ENST00000502605 298 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC098799.3-201ENST00000506095 438 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 PTGES3P3-201ENST00000511479 482 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 RNU6-875P-201ENST00000516488 106 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 RNA5SP135-201ENST00000517019 125 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 OR4A45P-201ENST00000529954 901 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC091489.2-201ENST00000566263 604 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 RN7SL802P-201ENST00000577858 299 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC078795.3-201ENST00000602913 472 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 PSMA6P4-201ENST00000603247 718 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 BNIP3P9-201ENST00000603714 553 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC233280.2-201ENST00000603917 1070 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC090578.1-201ENST00000604955 591 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC087045.1-201ENST00000605856 382 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC005332.6-201ENST00000613178 446 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC126177.8-201ENST00000618339 1015 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 DHX40P1-201ENST00000588725 1412 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC009229.4-201ENST00000623854 1947 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC092326.2-201ENST00000624772 1561 ntBASIC5.54□□□□□ -1.52
DDX11Q96FC9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
DDX11Q96FC9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
DDX11Q96FC9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC107982.1-201ENST00000507171 1300 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC139713.2-215ENST00000641428 5037 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 IGKV7-3-201ENST00000357453 298 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 RNU4-44P-201ENST00000363050 141 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 Y_RNA.97-201ENST00000363094 102 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 RNY4P14-201ENST00000363656 96 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 Y_RNA.372-201ENST00000365599 102 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 SNORD116-23-201ENST00000384645 92 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 SNORA40.3-201ENST00000390964 122 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AP000580.1-201ENST00000404439 358 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 BOLA3P4-201ENST00000418151 400 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AIMP1P1-201ENST00000418670 937 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC099336.2-201ENST00000422457 254 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 RPL18P10-201ENST00000425606 538 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 VDAC1P6-201ENST00000430062 855 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 UBE2V1P5-201ENST00000440070 405 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL589765.3-201ENST00000446084 462 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 ARL2BPP10-201ENST00000446487 531 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 RPL7P59-201ENST00000447700 943 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL118496.2-201ENST00000448300 230 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 PDSS1P2-201ENST00000449397 678 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 CEACAMP6-201ENST00000452007 574 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 SNRPFP4-201ENST00000456366 242 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC099560.2-201ENST00000457554 255 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC010307.1-201ENST00000467206 836 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC108751.2-201ENST00000469993 231 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC079382.1-201ENST00000493346 557 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC091951.2-201ENST00000500762 203 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 SCARNA22-201ENST00000503991 125 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC010342.1-201ENST00000514047 877 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 OR5M2P-201ENST00000529003 936 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC009643.1-201ENST00000532030 391 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 POLR2KP1-201ENST00000553226 168 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC136618.2-201ENST00000575091 400 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC090616.5-202ENST00000582111 297 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL354760.1-201ENST00000608357 643 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL158209.2-201ENST00000619266 216 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC079228.1-201ENST00000624774 1049 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 AL136164.3-201ENST00000624429 3978 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 AC017104.4-201ENST00000636283 1592 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DDX11Q96FC9 DHX9P1-201ENST00000436565 3076 ntBASIC5.53□□□□□ -1.52
DDX11Q96FC9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
DDX11Q96FC9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms