Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 MIR4512-201ENST00000583257 77 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC233280.2-201ENST00000603917 1070 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AL359999.1-201ENST00000604513 294 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC090578.1-201ENST00000604955 591 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC007684.1-201ENST00000609671 477 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 uc_338.18-201ENST00000615451 175 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 U4.5-201ENST00000617137 123 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AL445264.1-201ENST00000621719 171 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 OR5AK4P-201ENST00000635912 903 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 MTND5P26-201ENST00000426018 1752 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AC012020.1-201ENST00000624541 1728 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 OR14L1P-202ENST00000641545 3009 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 AL592182.3-201ENST00000642132 3304 ntBASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTHRC1Q96CG8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AP002001.2-201ENST00000529025 1469 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC108751.5-201ENST00000492880 1336 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 SNORA70F-201ENST00000384142 135 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 SNORA68.2-201ENST00000391263 128 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 RNA5SP397-201ENST00000391323 118 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 SDHCP2-201ENST00000398565 501 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL049697.2-201ENST00000403708 294 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 RPS3AP3-201ENST00000411933 242 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ISCA1P1-201ENST00000426679 387 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 RABEPKP1-201ENST00000440529 1026 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL022238.1-201ENST00000442557 355 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 H2AFZP6-201ENST00000444403 394 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC104073.1-201ENST00000451988 151 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 MTCO1P42-201ENST00000457379 726 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 PLGLA-201ENST00000465668 449 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC087312.1-201ENST00000471411 480 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ACTR3P3-201ENST00000480448 893 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC093767.1-201ENST00000504523 156 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 RNU6-506P-201ENST00000516553 94 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC022790.1-201ENST00000522872 204 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AP006289.1-201ENST00000538089 277 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 MIR4330-201ENST00000579077 105 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 MIR3682-201ENST00000581338 84 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC234771.5-201ENST00000600161 514 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC126118.1-201ENST00000607744 628 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 MIR6748-201ENST00000610433 71 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC024941.1-201ENST00000612250 334 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC009237.17-201ENST00000618111 748 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC072046.2-201ENST00000618366 268 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AC073534.2-201ENST00000620377 381 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL596275.2-204ENST00000641628 552 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 AL596275.2-206ENST00000641957 626 ntBASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTHRC1Q96CG8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AL391684.1-202ENST00000641293 1636 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC021146.4-201ENST00000309229 279 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 RNA5SP443-201ENST00000363083 132 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms