Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RANP9-201ENST00000519957 271 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC087808.1-201ENST00000520501 361 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AL391156.1-201ENST00000554965 554 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 MIR3614-201ENST00000581261 86 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AL645944.1-201ENST00000603857 493 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC079684.1-201ENST00000621405 437 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AC011460.1-201ENST00000636268 1834 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 CUL1P1-201ENST00000509510 2425 ntBASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.67□□□□□ -2.14
SPTSSBQ8NFR3 AL122126.1-201ENST00000546905 1318 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 RPL9P7-201ENST00000330965 580 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 FRG1CP-201ENST00000358464 769 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 RNA5SP181-201ENST00000410246 98 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 COX6CP15-201ENST00000426313 211 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 HMGB1P48-201ENST00000446155 598 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AL034418.1-201ENST00000448675 860 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 BUD31P2-201ENST00000449374 300 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 RPS3AP53-201ENST00000454716 778 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AL109741.2-201ENST00000455561 343 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 RPS4XP6-201ENST00000477670 797 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 RPL30P14-201ENST00000482744 348 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 RN7SL633P-201ENST00000488974 297 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC104109.1-201ENST00000498563 436 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 HMGN1P11-201ENST00000508668 303 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC021146.7-201ENST00000509604 775 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 SCARNA20.6-201ENST00000517251 106 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 MIR5187-201ENST00000583479 76 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC012493.2-201ENST00000595083 291 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 ZNF92P3-201ENST00000596594 954 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC006329.2-201ENST00000611491 394 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 MIR6889-201ENST00000613185 59 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC110079.1-202ENST00000635213 138 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 CR383658.2-201ENST00000547576 1525 ntBASIC1.66□□□□□ -2.14
SPTSSBQ8NFR3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
SPTSSBQ8NFR3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 AC079741.1-201ENST00000321498 212 ntBASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 SNORA1.3-201ENST00000384676 136 ntBASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 RPS4XP3-201ENST00000398541 413 ntBASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 RPEP3-201ENST00000425462 676 ntBASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 NDUFA5P10-201ENST00000432147 357 ntBASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 MTCYBP34-201ENST00000439552 670 ntBASIC1.65□□□□□ -2.15
SPTSSBQ8NFR3 VN1R34P-201ENST00000447387 883 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms