Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 RPS15AP29-201ENST00000445539 400 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 OR6K1P-201ENST00000456766 971 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 SNORD105B-201ENST00000458770 79 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 RPL7P23-201ENST00000493874 747 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC111000.2-201ENST00000507775 550 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC004062.1-201ENST00000509926 645 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 RPL7L1P13-201ENST00000511702 739 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 SNORA31.20-201ENST00000517111 133 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 OR4V1P-201ENST00000525394 1140 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 SETP2-201ENST00000553886 926 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 HSPE1P5-201ENST00000561489 272 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC023158.1-201ENST00000561632 1025 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC107954.1-201ENST00000565906 727 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC020914.6-201ENST00000594327 272 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.36□□□□□ -2.03
NUP35Q8NFH5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NUP35Q8NFH5 AC092447.7-201ENST00000422212 1621 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 RN7SKP227-201ENST00000364445 330 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 RNU4-31P-201ENST00000384211 141 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 MIR181B1-201ENST00000385240 110 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC007066.1-201ENST00000392902 381 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 SNORD88.1-201ENST00000408684 91 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 RNA5SP274-201ENST00000410484 108 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 Y_RNA.625-201ENST00000411256 107 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 USP9YP36-201ENST00000424581 829 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 SNRPEP4-201ENST00000435815 279 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 UBBP3-201ENST00000445497 241 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 GAPDHP39-201ENST00000481866 979 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 RNA5SP76-201ENST00000516277 87 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 POLR2KP1-201ENST00000553226 168 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC090751.1-201ENST00000566966 267 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 COX6CP3-201ENST00000580869 223 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC083760.1-201ENST00000589621 670 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 DUXAP4-201ENST00000603046 613 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC002076.2-201ENST00000617362 122 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AP004607.9-201ENST00000618202 316 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 AC022509.4-201ENST00000621404 572 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 MIR6733-201ENST00000635723 61 ntBASIC2.35□□□□□ -2.03
NUP35Q8NFH5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 AC092435.3-201ENST00000565538 3654 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 SNORA14A-201ENST00000364773 135 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 SNORD3H-201ENST00000384486 214 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 SNORA11B-201ENST00000408175 129 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 RNU2-6P-201ENST00000411404 190 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 RPL39P40-201ENST00000445481 146 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 NUTF2P7-201ENST00000453086 375 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 RPS29P12-201ENST00000460178 152 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP35Q8NFH5 HMGB1P3-201ENST00000502802 616 ntBASIC2.34□□□□□ -2.03
NUP35Q8NFH5 HMGN1P11-201ENST00000508668 303 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms