Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 SNORD3H-201ENST00000384486 214 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL355615.1-201ENST00000406187 641 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 RNU6ATAC-201ENST00000408749 126 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL035423.1-201ENST00000420331 213 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 KCTD10P1-201ENST00000434203 625 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 MTCYBP31-201ENST00000438855 1122 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 RPL23AP33-201ENST00000442301 452 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 ACTR3P3-201ENST00000480448 893 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 RN7SL283P-201ENST00000489055 303 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC104629.1-201ENST00000494226 508 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 POU5F1P7-201ENST00000508759 541 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 HIGD1AP3-201ENST00000515857 278 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 RNU1-95P-201ENST00000516357 160 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 RNU1-128P-201ENST00000516704 160 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 RNU4-60P-201ENST00000517239 135 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC090079.2-201ENST00000575289 768 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AP002371.2-201ENST00000624450 503 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 MIR4496-201ENST00000635896 61 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 AL590396.4-201ENST00000636779 956 ntBASIC3.79□□□□□ -1.8
ZNF397Q8NF99 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZNF397Q8NF99 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 ELL2P4-201ENST00000446870 1376 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC025263.3-201ENST00000622965 1396 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RNA5SP124-201ENST00000362739 110 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RNA5SP167-201ENST00000365461 116 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RNU6-207P-201ENST00000384137 107 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 BTBD10P2-201ENST00000404779 676 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RAB9AP3-201ENST00000412737 573 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 NDUFB4P5-201ENST00000415445 361 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RPL23AP82-202ENST00000427528 469 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC092017.2-201ENST00000427600 362 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 FO393414.1-201ENST00000428697 1184 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC044797.1-201ENST00000445744 679 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RAB9AP1-201ENST00000449393 573 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 OR51B8P-201ENST00000449892 769 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 CFTRP1-201ENST00000456646 183 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 CDC42P1-201ENST00000456658 548 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 SNORD105B-201ENST00000458770 79 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 CENPBD1P1-201ENST00000464061 469 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC078817.1-201ENST00000492623 435 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 HMGN1P11-201ENST00000508668 303 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC016065.2-201ENST00000514530 444 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 PAICSP4-201ENST00000517543 1253 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AF279873.1-201ENST00000523393 313 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 CENPUP2-201ENST00000555897 1186 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC017100.2-201ENST00000584628 355 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC008687.2-201ENST00000597865 520 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 RNA5SP108-201ENST00000605921 117 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC112503.1-201ENST00000608436 391 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC039056.2-201ENST00000622261 511 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC112200.1-201ENST00000625015 234 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 AC119674.1-207ENST00000641355 633 ntBASIC3.78□□□□□ -1.8
ZNF397Q8NF99 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZNF397Q8NF99 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms