Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 DYNLL1P6-201ENST00000503440 264 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 NDUFA5P12-201ENST00000503796 343 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 TMEM248P1-201ENST00000510579 951 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 MTCO3P15-201ENST00000526563 574 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AP000926.4-201ENST00000527351 454 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 TGIF1P1-201ENST00000558095 802 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 GAS5-AS1-201ENST00000602767 694 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 OR4G3P-201ENST00000633500 913 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AF001550.2-201ENST00000636643 217 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 ZNF663P-202ENST00000641770 1131 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 AL732372.2-225ENST00000642124 456 ntBASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
CCDC71LQ8N9Z2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC117529.2-201ENST00000512159 2068 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 SNORA72.3-201ENST00000365074 132 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 MIR649-201ENST00000384843 97 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 ZNF602P-201ENST00000405929 924 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL133264.1-201ENST00000407157 562 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL139098.1-201ENST00000407291 389 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 RNU4-78P-201ENST00000410940 126 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC096632.1-201ENST00000427395 310 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 GTF2IP3-201ENST00000433887 494 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 SETD6P1-201ENST00000444575 317 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 MRPL42P4-201ENST00000453267 443 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC091167.1-201ENST00000492017 396 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 PCBP2P3-201ENST00000509726 843 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC104057.1-201ENST00000515547 497 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 CDH12P4-201ENST00000517835 295 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 CDH12P3-201ENST00000517935 295 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 CDH12P1-201ENST00000518435 295 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AP001207.2-201ENST00000519490 539 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 OR8K4P-201ENST00000534608 872 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 TRAV15-201ENST00000556680 249 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL845331.3-202ENST00000562856 261 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC005412.1-201ENST00000580812 1049 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 SNRPGP15-201ENST00000600149 222 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC027449.1-201ENST00000608890 407 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL157392.4-201ENST00000609756 345 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 RMST_8.1-201ENST00000610287 165 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC008121.2-201ENST00000614647 523 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC114781.5-201ENST00000615297 108 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 CYCSP41-201ENST00000616920 296 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AL136164.4-201ENST00000625013 2135 ntBASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC71LQ8N9Z2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 AC026951.1-201ENST00000559530 2459 ntBASIC3.09□□□□□ -1.92
CCDC71LQ8N9Z2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms