Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 RPEP2-201ENST00000432149 701 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 VN1R54P-201ENST00000435210 1049 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 SSXP4-201ENST00000451349 245 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC092324.1-201ENST00000468671 324 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 RPL7L1P8-201ENST00000469911 741 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 RPS23P3-201ENST00000470993 430 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC023424.2-201ENST00000493479 777 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 MTCYBP17-201ENST00000503579 789 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 ARL2BPP6-201ENST00000512757 439 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC103783.1-201ENST00000520506 373 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 IGLV2-28-201ENST00000520681 304 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 DEFB131D-201ENST00000526803 184 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC063950.1-201ENST00000552036 308 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AL132857.1-201ENST00000555180 708 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC090888.3-201ENST00000558917 509 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 UBE2FP2-201ENST00000566646 462 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AP001160.4-201ENST00000596971 382 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 BNIP3P39-201ENST00000601077 554 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 DUXAP3-201ENST00000603616 594 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AL390208.1-201ENST00000605885 644 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AP003392.5-201ENST00000607857 415 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC024933.1-201ENST00000608472 348 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC016597.2-201ENST00000613256 341 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 AL513185.3-201ENST00000433335 1300 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 OR5BR1P-201ENST00000524992 1330 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.9□□□□□ -1.95
LINC01561Q8N1V8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RNU6-28P-201ENST00000362378 107 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RNA5SP322-201ENST00000363617 119 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 Y_RNA.192-201ENST00000363977 102 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RNU6-636P-201ENST00000384598 107 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 SNORA11F-201ENST00000408237 128 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 MIR1284-201ENST00000408337 120 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 SNORA3C-201ENST00000408792 125 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RN7SKP53-201ENST00000411337 315 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 CCDC58P2-201ENST00000417131 366 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 YPEL5P1-201ENST00000419731 367 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RPL21P109-201ENST00000422213 475 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AL359265.2-201ENST00000434367 631 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 SNRPEP4-201ENST00000435815 279 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AL512326.1-201ENST00000443050 721 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RPL12P26-201ENST00000452430 487 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RPL23AP81-201ENST00000455252 467 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RNU7-136P-201ENST00000458819 69 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC092754.2-201ENST00000463506 460 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC017015.1-201ENST00000477387 286 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RN7SL271P-201ENST00000487601 295 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 RPL7P23-201ENST00000493874 747 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC022483.1-201ENST00000514020 567 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC093677.1-201ENST00000514414 678 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AC105233.3-201ENST00000531125 744 ntBASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.89□□□□□ -1.95
LINC01561Q8N1V8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms