Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC28Q86X40 RPS3AP12-201ENST00000443616 753 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 BX510359.1-201ENST00000456973 237 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 HMGN2P13-201ENST00000476476 274 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 RPL7P23-201ENST00000493874 747 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 SEC11B-201ENST00000518383 499 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 HIGD1AP1-201ENST00000550979 275 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AL157394.1-201ENST00000562983 1224 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC012119.1-201ENST00000603184 222 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC006023.2-201ENST00000609916 167 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AL157817.1-201ENST00000614264 790 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 RMST_5.1-201ENST00000618704 126 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC022079.2-201ENST00000619739 566 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 LRRC77P-213ENST00000637727 880 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC004925.1-201ENST00000624256 2706 ntBASIC2.77□□□□□ -1.97
LRRC28Q86X40 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LRRC28Q86X40 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC28Q86X40 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC28Q86X40 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC28Q86X40 SNORA38.1-201ENST00000364172 131 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 RNU4-47P-201ENST00000410876 114 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AL390023.1-201ENST00000428836 262 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC104332.2-201ENST00000429959 156 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 RPL7P38-201ENST00000488396 739 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC010285.3-201ENST00000511668 676 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 OR6C73P-201ENST00000546432 358 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC092868.3-201ENST00000560515 784 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 MIR5680-201ENST00000577577 84 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 AL606834.2-201ENST00000602954 668 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 YPEL5P2-201ENST00000605553 359 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 OR2BH1P-201ENST00000608850 864 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 MIR7112-201ENST00000616126 65 ntBASIC2.76□□□□□ -1.97
LRRC28Q86X40 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LRRC28Q86X40 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC28Q86X40 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LRRC28Q86X40 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRRC28Q86X40 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRRC28Q86X40 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 SNORA26.7-201ENST00000391288 122 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 MTCYBP7-201ENST00000419540 1134 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 HSPE1P1-201ENST00000421494 318 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 AL139281.1-201ENST00000422120 335 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 AL356806.1-201ENST00000422524 916 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 COX6CP2-201ENST00000444980 225 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 RPL23AP55-201ENST00000498163 452 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 RN7SKP234-201ENST00000517173 224 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 SNORA70.24-201ENST00000517233 118 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 AC022884.3-201ENST00000579571 248 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 AL109653.1-201ENST00000603091 248 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 NF1P10-201ENST00000613227 742 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 AL442067.2-201ENST00000614033 363 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 AC009464.1-201ENST00000615731 469 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC28Q86X40 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.75□□□□□ -1.97
LRRC28Q86X40 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms