Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC104662.1-201ENST00000604448 511 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 AL356863.1-201ENST00000623378 1080 ntBASIC4.13□□□□□ -1.75
PRPF39Q86UA1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRPF39Q86UA1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 NUP58P1-201ENST00000502546 1738 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RNU4-68P-201ENST00000364314 141 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 SNORA7.2-201ENST00000364446 145 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RNU6-1181P-201ENST00000384191 106 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 MIR554-201ENST00000384874 96 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 MIR506-201ENST00000384998 124 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RN7SKP56-201ENST00000410513 331 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 TPT1P2-201ENST00000413105 503 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 NANOGP5-201ENST00000424456 877 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC092648.1-201ENST00000425870 423 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 USP9YP24-201ENST00000434374 697 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 NANOGP2-201ENST00000435391 727 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AF228730.2-201ENST00000438784 848 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC092427.1-201ENST00000439177 601 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AL356535.1-201ENST00000440335 398 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 USP9YP17-201ENST00000444617 696 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 Z95327.1-201ENST00000446082 482 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 ZNF886P-201ENST00000450781 723 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 SNORA84-201ENST00000459229 133 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC005410.1-202ENST00000460347 485 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 FTH1P21-201ENST00000512179 511 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 NPM1P41-201ENST00000512920 831 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RN7SKP157-201ENST00000516174 282 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 OR4P1P-201ENST00000530808 1136 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC006518.1-201ENST00000541449 943 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC006130.2-201ENST00000586202 326 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RNU4-5P-201ENST00000607255 135 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC128687.2-201ENST00000609657 566 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC078899.5-201ENST00000612475 178 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC026368.1-201ENST00000614934 690 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC073348.1-201ENST00000623002 331 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 AC040168.1-201ENST00000623594 991 ntBASIC4.12□□□□□ -1.75
PRPF39Q86UA1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRPF39Q86UA1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 FAM35DP-201ENST00000323387 2712 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RNU6-600P-201ENST00000362524 99 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RNA5SP258-201ENST00000362750 119 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RNU6-1249P-201ENST00000363237 111 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 MIR607-201ENST00000385241 96 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AL590084.1-201ENST00000407885 387 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RN7SKP159-201ENST00000410657 292 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RNU4-22P-201ENST00000411058 166 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 MTCO2P8-201ENST00000412213 658 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 HSPE1P12-201ENST00000412576 301 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RAC1P3-201ENST00000416129 580 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AIMP1P1-201ENST00000418670 937 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RPL7P44-201ENST00000424827 742 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 USP9YP31-201ENST00000431405 881 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 MRPS18BP2-201ENST00000434310 759 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AL645638.1-201ENST00000440519 361 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 RPS4XP4-201ENST00000443195 763 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 ELOCP13-201ENST00000443934 329 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 MTCYBP11-201ENST00000447254 1109 ntBASIC4.11□□□□□ -1.75
PRPF39Q86UA1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms