Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.23□□□□□ -1.89
H3F3CQ6NXT2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.23□□□□□ -1.89
H3F3CQ6NXT2 AF117829.1-206ENST00000621883 3802 ntBASIC3.23□□□□□ -1.89
H3F3CQ6NXT2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
H3F3CQ6NXT2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 ZNF542P-204ENST00000482727 1305 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 FRG1CP-201ENST00000358464 769 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RNU6-252P-201ENST00000363232 107 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 MT-TC-201ENST00000387405 66 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AL391417.1-201ENST00000404100 426 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RNA5SP129-201ENST00000410276 118 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC017079.2-201ENST00000416102 485 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC005189.1-201ENST00000431286 310 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RPL26P28-201ENST00000451325 435 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC093663.1-201ENST00000497190 394 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC104108.1-201ENST00000509930 412 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RNU6-202P-201ENST00000515998 96 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RNU2-27P-201ENST00000516185 142 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 RN7SKP116-201ENST00000516902 319 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC025918.2-201ENST00000558683 763 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC006254.3-201ENST00000603353 884 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AL590282.1-201ENST00000610379 1136 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AC092608.3-201ENST00000625017 386 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AL353746.1-201ENST00000566293 6881 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 MTND4P34-201ENST00000572715 1371 ntBASIC3.22□□□□□ -1.89
H3F3CQ6NXT2 AL359893.1-201ENST00000447628 1580 ntBASIC3.21□□□□□ -1.89
H3F3CQ6NXT2 SEC63P2-201ENST00000503863 1939 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC021755.1-201ENST00000559747 1447 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RNU6-1339P-201ENST00000363574 91 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RNU6-761P-201ENST00000384148 107 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RNU6-837P-201ENST00000391056 108 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AL356057.1-202ENST00000402263 756 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 SSXP10-201ENST00000402595 565 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AL353692.2-201ENST00000407054 335 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 ARL2BPP3-201ENST00000421226 480 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 OSTCP5-201ENST00000425293 453 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC007967.1-201ENST00000455422 1159 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RN7SL601P-201ENST00000471221 293 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 CYCSP20-201ENST00000473154 315 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC084357.1-201ENST00000473404 255 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RPL23AP44-201ENST00000482216 473 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 MTCO3P35-201ENST00000485582 781 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RNU6-488P-201ENST00000515918 99 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 IGKV2D-36-201ENST00000518643 226 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 RPL12P22-201ENST00000519073 490 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AP006245.1-201ENST00000522549 120 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 CKS1BP1-201ENST00000555221 240 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AL161756.2-201ENST00000604597 246 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 AC004775.1-201ENST00000607389 753 ntBASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.21□□□□□ -1.9
H3F3CQ6NXT2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms