Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC092593.1-201ENST00000515413 1815 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRRK2Q5S007 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 AL121882.1-201ENST00000422893 417 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 AC108860.1-201ENST00000484521 383 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRRK2Q5S007 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRRK2Q5S007 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LRRK2Q5S007 MTND5P24-201ENST00000438892 1767 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 AC107081.1-201ENST00000414975 361 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 HMGB1P15-201ENST00000453854 435 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 MTCO1P42-201ENST00000457379 726 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
LRRK2Q5S007 KPNA2P2-201ENST00000419546 1489 ntBASIC2.37□□□□□ -2.03
LRRK2Q5S007 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRRK2Q5S007 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 AC010469.1-201ENST00000463864 576 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 RPL23AP42-201ENST00000471152 471 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 OR5H5P-201ENST00000503164 928 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 AC107871.2-201ENST00000612894 502 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRRK2Q5S007 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRRK2Q5S007 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 AC004972.1-201ENST00000623934 2209 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 SNORD74.4-201ENST00000364129 80 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 RNU6-253P-201ENST00000384730 105 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 SNORA17.3-201ENST00000391159 129 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 RNU6-55P-201ENST00000411092 107 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 RNU6-954P-201ENST00000411355 107 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 RN7SKP282-201ENST00000516824 299 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 NRBF2P1-201ENST00000587407 859 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 AC027514.1-201ENST00000588561 1603 ntBASIC2.36□□□□□ -2.03
LRRK2Q5S007 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
LRRK2Q5S007 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LRRK2Q5S007 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 RNA5SP104-201ENST00000410989 118 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 RPS12P2-201ENST00000439728 269 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LRRK2Q5S007 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 MYL12AP1-201ENST00000518490 515 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC009237.17-201ENST00000618111 748 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 PISRT1-201ENST00000626175 531 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRRK2Q5S007 RNY1P10-201ENST00000363268 113 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 RNA5SP325-201ENST00000363756 130 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 MTND2P25-201ENST00000449028 610 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 RPL23AP15-201ENST00000450202 459 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC011602.1-201ENST00000546484 331 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.35□□□□□ -2.03
LRRK2Q5S007 AC096644.4-201ENST00000563417 2912 ntBASIC2.35□□□□□ -2.03
LRRK2Q5S007 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRRK2Q5S007 TRBV1-201ENST00000476502 284 ntBASIC2.34□□□□□ -2.03
LRRK2Q5S007 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
LRRK2Q5S007 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.34□□□□□ -2.03
LRRK2Q5S007 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.34□□□□□ -2.03
LRRK2Q5S007 AP003102.1-201ENST00000525638 661 ntBASIC2.34□□□□□ -2.03
LRRK2Q5S007 AC243972.3-201ENST00000539655 198 ntBASIC2.34□□□□□ -2.03
LRRK2Q5S007 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.34□□□□□ -2.03
LRRK2Q5S007 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LRRK2Q5S007 AP003117.2-201ENST00000606010 545 ntBASIC2.34□□□□□ -2.03
LRRK2Q5S007 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.34□□□□□ -2.03
LRRK2Q5S007 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRRK2Q5S007 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
LRRK2Q5S007 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LRRK2Q5S007 AL592494.2-201ENST00000425455 1548 ntBASIC2.34□□□□□ -2.04
LRRK2Q5S007 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.34□□□□□ -2.04
LRRK2Q5S007 MIR93-201ENST00000385024 80 ntBASIC2.34□□□□□ -2.04
LRRK2Q5S007 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.34□□□□□ -2.04
LRRK2Q5S007 RPS20P5-201ENST00000434808 360 ntBASIC2.34□□□□□ -2.04
LRRK2Q5S007 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.34□□□□□ -2.04
LRRK2Q5S007 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms