Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RABEPKP1-201ENST00000440529 1026 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC114495.1-201ENST00000441274 436 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN1BQ07699 USP9YP17-201ENST00000444617 696 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC073264.2-201ENST00000448886 166 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN1BQ07699 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 DUXAP8-207ENST00000456786 622 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 MTND1P16-201ENST00000465177 898 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC078785.3-201ENST00000476607 425 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 ACTG1P13-201ENST00000486987 1043 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 COX7A2P2-201ENST00000505291 250 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 MLLT10P2-201ENST00000506434 249 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 XKRY-201ENST00000510392 1100 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 RNA5SP468-201ENST00000516782 93 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 OR5D15P-201ENST00000531671 942 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC006064.5-201ENST00000541782 248 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN1BQ07699 CCDC58P3-201ENST00000590792 430 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 MTCO2P2-201ENST00000591258 225 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AP001160.4-201ENST00000596971 382 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC011458.1-201ENST00000604034 617 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC104662.1-201ENST00000604448 511 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC106052.1-201ENST00000608029 497 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AL391497.1-201ENST00000608671 547 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 DUXAP10-204ENST00000612052 616 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AC016597.2-201ENST00000613256 341 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
SCN1BQ07699 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN1BQ07699 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 AC116096.1-201ENST00000566804 2314 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AP001148.1-201ENST00000624124 2359 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 RAD17P1-201ENST00000418130 2042 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SCN1BQ07699 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SCN1BQ07699 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 AL645937.1-201ENST00000641739 1652 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 OR4K15-201ENST00000305051 1216 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 Y_RNA.192-201ENST00000363977 102 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 RNU6-906P-201ENST00000384700 70 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 RNU6-1242P-201ENST00000391052 103 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC097374.1-203ENST00000400783 485 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 MIR1179-201ENST00000408703 91 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SCN1BQ07699 TMSB10P2-201ENST00000416049 131 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC119751.6-201ENST00000416712 186 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 MTATP6P27-201ENST00000416987 621 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 RPL7P30-201ENST00000420888 709 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 AC016712.1-201ENST00000431088 378 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 VN1R25P-201ENST00000443385 738 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AL359073.1-201ENST00000448036 403 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 MTCO3P16-201ENST00000454456 754 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 VN1R40P-201ENST00000455196 941 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 ST13P14-201ENST00000474095 734 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC110792.1-201ENST00000491826 472 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.66□□□□□ -1.82
SCN1BQ07699 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.66□□□□□ -1.82
SCN1BQ07699 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 RN7SKP92-201ENST00000517266 244 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN1BQ07699 SETP7-201ENST00000552169 453 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 GNRHR2P1-201ENST00000555315 631 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC084783.1-201ENST00000565846 910 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AL512347.1-201ENST00000566420 503 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC007599.1-201ENST00000568688 1174 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 FAM60BP-201ENST00000578364 658 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.66□□□□□ -1.82
SCN1BQ07699 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.66□□□□□ -1.82
SCN1BQ07699 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 RPP40P2-201ENST00000603596 712 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 DUXAP3-201ENST00000603616 594 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC144521.1-201ENST00000607148 956 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC080013.4-201ENST00000607624 649 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AL391262.2-201ENST00000622466 494 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AL356585.4-201ENST00000623078 1229 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC095031.1-201ENST00000623685 672 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 OR4G3P-201ENST00000633500 913 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 AC116618.1-201ENST00000634617 774 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms