Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AP002791.1-201ENST00000623291 381 ntBASIC3.9□□□□□ -1.79
CDK3Q00526 AC097520.1-201ENST00000624435 385 ntBASIC3.9□□□□□ -1.79
CDK3Q00526 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK3Q00526 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK3Q00526 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.9□□□□□ -1.79
CDK3Q00526 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.9□□□□□ -1.79
CDK3Q00526 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDK3Q00526 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK3Q00526 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK3Q00526 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK3Q00526 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 SNRPEP3-201ENST00000338402 276 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 RNA5SP97-201ENST00000365006 84 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 RNU6-157P-201ENST00000383957 107 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 RNU6-1122P-201ENST00000384449 107 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 MIR124-3-201ENST00000384866 87 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AL035410.1-201ENST00000427409 427 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK3Q00526 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK3Q00526 CKS1BP5-201ENST00000434172 273 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AC083863.1-201ENST00000438811 231 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 RPL23AP33-201ENST00000442301 452 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK3Q00526 CDC27P1-201ENST00000445384 715 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 EXTL2P1-201ENST00000446218 416 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK3Q00526 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.89□□□□□ -1.79
CDK3Q00526 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK3Q00526 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK3Q00526 PDCL2P2-201ENST00000533651 189 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK3Q00526 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK3Q00526 AC087465.1-201ENST00000560574 245 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AC009712.1-201ENST00000564938 316 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.89□□□□□ -1.79
CDK3Q00526 AL354943.1-201ENST00000572103 781 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK3Q00526 AC092650.2-201ENST00000619984 902 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK3Q00526 AC073530.2-201ENST00000623987 261 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CDK3Q00526 AC005539.1-201ENST00000443768 1479 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 AP001486.2-201ENST00000561652 5113 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK3Q00526 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK3Q00526 ZNF37BP-203ENST00000452306 1352 ntBASIC3.89□□□□□ -1.79
CDK3Q00526 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDK3Q00526 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK3Q00526 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK3Q00526 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK3Q00526 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CDK3Q00526 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDK3Q00526 RNU6-1214P-201ENST00000363650 109 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 RNU6-374P-201ENST00000364146 108 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 RNU6-356P-201ENST00000384140 107 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AC016769.3-201ENST00000396562 315 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK3Q00526 SNORA11-201ENST00000408789 128 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 RNU6-757P-201ENST00000410334 100 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 RN7SKP202-201ENST00000410439 330 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 RN7SKP159-201ENST00000410657 292 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 CYCSP19-201ENST00000411715 316 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 TIMM9P2-201ENST00000419324 266 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AC005005.2-201ENST00000420779 380 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 RPL7P53-201ENST00000421245 739 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK3Q00526 MTND1P32-201ENST00000433043 938 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK3Q00526 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDK3Q00526 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK3Q00526 AC092427.1-201ENST00000439177 601 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 MTND2P20-201ENST00000440805 661 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 MTCYBP11-201ENST00000447254 1109 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK3Q00526 AL121877.1-201ENST00000453704 622 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 ANKRD26P4-201ENST00000455755 950 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK3Q00526 RPL21P11-201ENST00000461458 483 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AL139099.1-201ENST00000497398 403 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 MTCYBP17-201ENST00000503579 789 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AC104090.1-201ENST00000506341 1171 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 AC021146.8-201ENST00000507455 733 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK3Q00526 IGKV2D-36-201ENST00000518643 226 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK3Q00526 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK3Q00526 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK3Q00526 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.88□□□□□ -1.79
CDK3Q00526 GNRHR2P1-201ENST00000555315 631 ntBASIC3.88□□□□□ -1.79
CDK3Q00526 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK3Q00526 DUXAP1-201ENST00000556632 463 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms