Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MTCYBP39-201ENST00000437562 491 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 MUPP-201ENST00000438111 566 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL138878.2-201ENST00000440581 1241 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC002381.1-201ENST00000447049 280 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AL445669.2-201ENST00000454425 421 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 BTF3P5-201ENST00000457252 467 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CX3CL1P78423 RPS27AP17-201ENST00000463344 455 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 RPL23AP2-201ENST00000471227 466 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 UBTFL6-201ENST00000477929 1024 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.55□□□□□ -1.84
CX3CL1P78423 RPS3AP43-201ENST00000479743 781 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 FAM172BP-201ENST00000487497 1089 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC007686.1-201ENST00000488511 463 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CL1P78423 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC093853.1-201ENST00000515689 483 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CL1P78423 RN7SKP92-201ENST00000517266 244 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 IFITM8P-201ENST00000522529 394 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 OR6C7P-201ENST00000547875 934 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CL1P78423 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CX3CL1P78423 CYP4A43P-201ENST00000568156 121 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC141257.3-201ENST00000572906 215 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC053481.3-201ENST00000577881 843 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AL355812.1-201ENST00000603215 216 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC112230.1-201ENST00000604342 547 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL390208.1-201ENST00000605885 644 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AP002360.3-201ENST00000607673 710 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL357080.1-201ENST00000617394 239 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC009039.2-201ENST00000624524 529 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AC006065.6-201ENST00000625201 545 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CL1P78423 AC092192.1-201ENST00000633154 1018 ntBASIC3.55□□□□□ -1.84
CX3CL1P78423 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CL1P78423 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CL1P78423 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CL1P78423 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.55□□□□□ -1.84
CX3CL1P78423 FAM91A3P-201ENST00000456826 2544 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CX3CL1P78423 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AC067945.1-201ENST00000342609 618 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 RNA5SP505-201ENST00000364748 108 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 RNU6-398P-201ENST00000384143 109 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 RNU1-44P-201ENST00000384453 163 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 MIR192-201ENST00000384915 110 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CX3CL1P78423 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC007066.1-201ENST00000392902 381 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 RNU4-78P-201ENST00000410940 126 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 RNA5SP39-201ENST00000411245 120 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 RPL7AP25-201ENST00000423357 805 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 CENPIP1-201ENST00000425713 902 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 MRPS18BP2-201ENST00000434310 759 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 HLA-N-201ENST00000437516 135 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CL1P78423 MTCO1P27-201ENST00000448269 226 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CL1P78423 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 RPS29P22-201ENST00000472363 168 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AC012170.1-201ENST00000495139 359 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.54□□□□□ -1.84
CX3CL1P78423 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CL1P78423 AK3P4-201ENST00000504283 583 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms