Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH6P55285 AC104108.1-201ENST00000509930 412 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH6P55285 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH6P55285 AC007458.1-201ENST00000542812 373 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH6P55285 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH6P55285 AC017100.2-201ENST00000584628 355 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC008507.1-201ENST00000587506 734 ntBASIC3.45□□□□□ -1.86
CDH6P55285 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 AC008687.2-201ENST00000597865 520 ntBASIC3.45□□□□□ -1.86
CDH6P55285 SNRPGP15-201ENST00000600149 222 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AC008739.3-201ENST00000603262 127 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH6P55285 SNORD39.4-201ENST00000620099 78 ntBASIC3.45□□□□□ -1.86
CDH6P55285 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 AL109659.3-201ENST00000624985 950 ntBASIC3.45□□□□□ -1.86
CDH6P55285 AL590396.2-201ENST00000636511 1041 ntBASIC3.45□□□□□ -1.86
CDH6P55285 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDH6P55285 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH6P55285 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH6P55285 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH6P55285 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH6P55285 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH6P55285 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDH6P55285 RNU1-70P-201ENST00000362618 164 ntBASIC3.44□□□□□ -1.86
CDH6P55285 RNA5SP119-201ENST00000362715 117 ntBASIC3.44□□□□□ -1.86
CDH6P55285 RNU1-85P-201ENST00000364127 164 ntBASIC3.44□□□□□ -1.86
CDH6P55285 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH6P55285 SNORA11C-201ENST00000408532 129 ntBASIC3.44□□□□□ -1.86
CDH6P55285 RNU6-272P-201ENST00000411028 104 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AC012065.2-201ENST00000421295 375 ntBASIC3.44□□□□□ -1.86
CDH6P55285 ARL4AP4-201ENST00000434170 518 ntBASIC3.44□□□□□ -1.86
CDH6P55285 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH6P55285 AC092754.2-201ENST00000463506 460 ntBASIC3.44□□□□□ -1.86
CDH6P55285 RPL6P9-201ENST00000466502 859 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AC015724.1-201ENST00000478577 156 ntBASIC3.44□□□□□ -1.86
CDH6P55285 RN7SL293P-201ENST00000481765 281 ntBASIC3.44□□□□□ -1.86
CDH6P55285 RPL21P129-201ENST00000491732 478 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AC093663.1-201ENST00000497190 394 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH6P55285 RPL12P22-201ENST00000519073 490 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AF279873.1-201ENST00000523393 313 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH6P55285 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH6P55285 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH6P55285 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH6P55285 AC004024.1-201ENST00000549244 247 ntBASIC3.44□□□□□ -1.86
CDH6P55285 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH6P55285 ATP5F1P7-201ENST00000567330 760 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH6P55285 AL009028.1-201ENST00000604895 802 ntBASIC3.44□□□□□ -1.86
CDH6P55285 AL450270.1-201ENST00000606160 391 ntBASIC3.44□□□□□ -1.86
CDH6P55285 uc_338.1-201ENST00000612113 180 ntBASIC3.44□□□□□ -1.86
CDH6P55285 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH6P55285 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH6P55285 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH6P55285 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
CDH6P55285 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH6P55285 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH6P55285 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
CDH6P55285 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH6P55285 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDH6P55285 RNU6-335P-201ENST00000364563 113 ntBASIC3.43□□□□□ -1.86
CDH6P55285 MIR490-201ENST00000384865 128 ntBASIC3.43□□□□□ -1.86
CDH6P55285 RNA5SP107-201ENST00000411358 122 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH6P55285 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH6P55285 CST9LP2-201ENST00000437612 320 ntBASIC3.43□□□□□ -1.86
CDH6P55285 VN1R34P-201ENST00000447387 883 ntBASIC3.43□□□□□ -1.86
CDH6P55285 MTND2P3-201ENST00000452458 470 ntBASIC3.43□□□□□ -1.86
CDH6P55285 DNAJC19P8-201ENST00000452887 259 ntBASIC3.43□□□□□ -1.86
CDH6P55285 TPRKBP1-201ENST00000456243 481 ntBASIC3.43□□□□□ -1.86
CDH6P55285 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH6P55285 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH6P55285 RPL7P38-201ENST00000488396 739 ntBASIC3.43□□□□□ -1.86
CDH6P55285 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH6P55285 HMGB3P15-201ENST00000507326 574 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC133963.2-201ENST00000513686 578 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH6P55285 RNU6-488P-201ENST00000515918 99 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.43□□□□□ -1.86
CDH6P55285 DUXAP2-201ENST00000519198 589 ntBASIC3.43□□□□□ -1.86
CDH6P55285 IGHV3-76-201ENST00000522465 295 ntBASIC3.43□□□□□ -1.86
CDH6P55285 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.43□□□□□ -1.86
CDH6P55285 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDH6P55285 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH6P55285 EIF5A2P1-201ENST00000564027 460 ntBASIC3.43□□□□□ -1.86
CDH6P55285 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH6P55285 MIR4276-201ENST00000584832 70 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC079880.2-201ENST00000603790 1213 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AL162713.1-201ENST00000604480 262 ntBASIC3.43□□□□□ -1.86
CDH6P55285 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.43□□□□□ -1.86
CDH6P55285 AC090425.2-201ENST00000608818 501 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC020658.4-201ENST00000613987 684 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC073569.3-201ENST00000619055 682 ntBASIC3.43□□□□□ -1.86
CDH6P55285 AC015967.1-201ENST00000619893 476 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms