Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LIMK1P53667 OTUD4P1-201ENST00000237841 3067 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 RNU6-600P-201ENST00000362524 99 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 RNU6-492P-201ENST00000363035 104 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 RNU4-51P-201ENST00000364206 140 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 RNU6-707P-201ENST00000364647 95 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LIMK1P53667 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LIMK1P53667 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.05□□□□□ -1.76
LIMK1P53667 AL136133.1-201ENST00000413694 376 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 Z75741.2-201ENST00000417272 1167 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AL391219.1-201ENST00000422570 483 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 MOB1AP1-201ENST00000430903 535 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 RPL23AP25-201ENST00000430973 463 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 HMGB1P12-201ENST00000438594 598 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AC093155.1-201ENST00000440164 826 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.05□□□□□ -1.76
LIMK1P53667 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.05□□□□□ -1.76
LIMK1P53667 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.05□□□□□ -1.76
LIMK1P53667 AC112492.1-201ENST00000449607 712 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 DDX39BP2-208ENST00000453923 258 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 OR9M1P-201ENST00000459641 921 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 PPIAP15-201ENST00000479662 484 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 RPL7P47-201ENST00000497299 556 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AL358832.1-201ENST00000497800 389 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.05□□□□□ -1.76
LIMK1P53667 AC119751.5-201ENST00000514077 770 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.05□□□□□ -1.76
LIMK1P53667 IGKV2D-19-201ENST00000523346 262 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.05□□□□□ -1.76
LIMK1P53667 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.05□□□□□ -1.76
LIMK1P53667 AC107016.1-201ENST00000550463 337 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 LSM6P2-201ENST00000552208 177 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.05□□□□□ -1.76
LIMK1P53667 MIR3912-201ENST00000577566 105 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.05□□□□□ -1.76
LIMK1P53667 AL160237.3-201ENST00000604114 1013 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 AP000240.1-201ENST00000609910 452 ntBASIC4.05□□□□□ -1.76
LIMK1P53667 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.05□□□□□ -1.76
LIMK1P53667 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LIMK1P53667 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LIMK1P53667 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LIMK1P53667 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.04□□□□□ -1.76
LIMK1P53667 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 ZNF29P-201ENST00000225587 168 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LIMK1P53667 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIMK1P53667 RNA5SP307-201ENST00000362863 116 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 RNU1-63P-201ENST00000383902 164 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
LIMK1P53667 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 FCF1P2-201ENST00000415284 583 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC009237.2-201ENST00000421358 284 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 GTF2IP23-201ENST00000423746 351 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 Z93242.1-201ENST00000427102 353 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 HMGN2P31-201ENST00000432430 273 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LIMK1P53667 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.04□□□□□ -1.76
LIMK1P53667 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC113347.3-201ENST00000509113 148 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 MTCYBP41-201ENST00000528913 1123 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 AL049838.1-201ENST00000563647 981 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 AL360157.1-201ENST00000565962 87 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 MTND3P13-201ENST00000574391 343 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 RPP40P2-201ENST00000603596 712 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 AC027449.1-201ENST00000608890 407 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 AC092954.1-201ENST00000609121 445 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.04□□□□□ -1.76
LIMK1P53667 U6.105-201ENST00000637379 88 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 AC008013.2-202ENST00000637965 364 ntBASIC4.04□□□□□ -1.76
LIMK1P53667 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LIMK1P53667 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms