Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AP001002.2-201ENST00000625137 386 ntBASIC3.95□□□□□ -1.78
LHX1P48742 AP000553.6-201ENST00000641242 118 ntBASIC3.95□□□□□ -1.78
LHX1P48742 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.95□□□□□ -1.78
LHX1P48742 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.95□□□□□ -1.78
LHX1P48742 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.95□□□□□ -1.78
LHX1P48742 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LHX1P48742 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LHX1P48742 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
LHX1P48742 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LHX1P48742 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LHX1P48742 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
LHX1P48742 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.94□□□□□ -1.78
LHX1P48742 SAGE4P-201ENST00000442271 3381 ntBASIC3.94□□□□□ -1.78
LHX1P48742 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LHX1P48742 RNU6-251P-201ENST00000363235 104 ntBASIC3.94□□□□□ -1.78
LHX1P48742 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
LHX1P48742 SUGT1P1-201ENST00000379514 476 ntBASIC3.94□□□□□ -1.78
LHX1P48742 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.94□□□□□ -1.78
LHX1P48742 RNU6-636P-201ENST00000384598 107 ntBASIC3.94□□□□□ -1.78
LHX1P48742 MIR3074-201ENST00000384885 81 ntBASIC3.94□□□□□ -1.78
LHX1P48742 MIR153-1-201ENST00000384914 90 ntBASIC3.94□□□□□ -1.78
LHX1P48742 RPL7P60-201ENST00000397636 735 ntBASIC3.94□□□□□ -1.78
LHX1P48742 SSXP10-201ENST00000402595 565 ntBASIC3.94□□□□□ -1.78
LHX1P48742 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AL592310.1-201ENST00000414330 671 ntBASIC3.94□□□□□ -1.78
LHX1P48742 SSR1P2-201ENST00000415208 787 ntBASIC3.94□□□□□ -1.78
LHX1P48742 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 AC092634.6-201ENST00000418558 192 ntBASIC3.94□□□□□ -1.78
LHX1P48742 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 MRPS36P1-201ENST00000421291 307 ntBASIC3.94□□□□□ -1.78
LHX1P48742 OR51AB1P-201ENST00000429046 620 ntBASIC3.94□□□□□ -1.78
LHX1P48742 PSMA2P3-201ENST00000429685 675 ntBASIC3.94□□□□□ -1.78
LHX1P48742 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.94□□□□□ -1.78
LHX1P48742 AC007327.1-201ENST00000447461 264 ntBASIC3.94□□□□□ -1.78
LHX1P48742 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
LHX1P48742 AC010307.1-201ENST00000467206 836 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC108734.3-201ENST00000481241 1165 ntBASIC3.94□□□□□ -1.78
LHX1P48742 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 AC109458.1-201ENST00000508858 316 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 AC104057.1-201ENST00000515547 497 ntBASIC3.94□□□□□ -1.78
LHX1P48742 RN7SKP18-201ENST00000516005 275 ntBASIC3.94□□□□□ -1.78
LHX1P48742 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.94□□□□□ -1.78
LHX1P48742 RN7SKP209-201ENST00000516888 304 ntBASIC3.94□□□□□ -1.78
LHX1P48742 SNORA48.10-201ENST00000516965 160 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC026403.1-201ENST00000518938 295 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC087808.1-201ENST00000520501 361 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.94□□□□□ -1.78
LHX1P48742 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.94□□□□□ -1.78
LHX1P48742 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.94□□□□□ -1.78
LHX1P48742 MIR4429-201ENST00000580105 73 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.94□□□□□ -1.78
LHX1P48742 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.94□□□□□ -1.78
LHX1P48742 AL390838.2-201ENST00000602394 274 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.94□□□□□ -1.78
LHX1P48742 AC068722.2-201ENST00000618734 544 ntBASIC3.94□□□□□ -1.78
LHX1P48742 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LHX1P48742 AL034408.1-202ENST00000636088 415 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC090897.3-201ENST00000636973 1157 ntBASIC3.94□□□□□ -1.78
LHX1P48742 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LHX1P48742 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
LHX1P48742 PNPT1P2-201ENST00000456768 2050 ntBASIC3.94□□□□□ -1.78
LHX1P48742 AC117529.2-201ENST00000512159 2068 ntBASIC3.94□□□□□ -1.78
LHX1P48742 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LHX1P48742 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 AC007685.1-201ENST00000329806 452 ntBASIC3.93□□□□□ -1.78
LHX1P48742 SNORA73.2-201ENST00000364946 201 ntBASIC3.93□□□□□ -1.78
LHX1P48742 RNU6-1226P-201ENST00000384317 107 ntBASIC3.93□□□□□ -1.78
LHX1P48742 SNORA70E-201ENST00000384492 135 ntBASIC3.93□□□□□ -1.78
LHX1P48742 MIR23B-201ENST00000384832 97 ntBASIC3.93□□□□□ -1.78
LHX1P48742 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.93□□□□□ -1.78
LHX1P48742 RPL23AP47-201ENST00000408017 460 ntBASIC3.93□□□□□ -1.78
LHX1P48742 ATP5A1P2-201ENST00000412323 255 ntBASIC3.93□□□□□ -1.78
LHX1P48742 SYF2P2-201ENST00000417620 583 ntBASIC3.93□□□□□ -1.78
LHX1P48742 RPS12P23-201ENST00000419579 400 ntBASIC3.93□□□□□ -1.78
LHX1P48742 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.93□□□□□ -1.78
LHX1P48742 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 AL050321.1-201ENST00000432363 400 ntBASIC3.93□□□□□ -1.78
LHX1P48742 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.93□□□□□ -1.78
LHX1P48742 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.93□□□□□ -1.78
LHX1P48742 VN1R34P-201ENST00000447387 883 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.93□□□□□ -1.78
LHX1P48742 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.93□□□□□ -1.78
LHX1P48742 MTCO3P35-201ENST00000485582 781 ntBASIC3.93□□□□□ -1.78
LHX1P48742 RNF138P1-201ENST00000502765 546 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC020699.1-201ENST00000505161 445 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC004069.2-201ENST00000505438 1114 ntBASIC3.93□□□□□ -1.78
LHX1P48742 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms