Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 MRPS31P2-201ENST00000451581 518 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC006539.3-201ENST00000454258 129 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 snoU13.3-201ENST00000459441 104 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC092754.2-201ENST00000463506 460 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC087879.1-201ENST00000474343 374 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 RPL21P47-201ENST00000483696 477 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 FCF1P3-201ENST00000496394 590 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 PCBP2P3-201ENST00000509726 843 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AP003049.1-201ENST00000529418 457 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC103843.2-201ENST00000530523 682 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC017100.2-201ENST00000584628 355 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC245100.7-201ENST00000609678 442 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 VN1R9P-201ENST00000614184 867 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AP003400.6-201ENST00000624698 740 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC009093.8-201ENST00000641769 292 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AL365440.1-201ENST00000436135 2167 ntBASIC3.09□□□□□ -1.91
CSNK1A1P48729 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.92
CSNK1A1P48729 AC093908.1-201ENST00000623125 8092 ntBASIC3.09□□□□□ -1.92
CSNK1A1P48729 AC118273.1-201ENST00000525324 3006 ntBASIC3.09□□□□□ -1.92
CSNK1A1P48729 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 SNORA62.3-201ENST00000365110 153 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 RPL23AP47-201ENST00000408017 460 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 RPS15AP6-201ENST00000420703 385 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AL606495.1-201ENST00000422100 813 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC093422.3-201ENST00000428506 305 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC073063.1-201ENST00000434352 607 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 HSPD1P21-201ENST00000436541 245 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 HMGN2P20-201ENST00000437531 273 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 RPS26P30-201ENST00000443431 335 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 DNAJC19P8-201ENST00000452887 259 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC106707.2-201ENST00000484182 374 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 OR5H3P-201ENST00000502817 919 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC098799.1-201ENST00000504752 800 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 HMGB3P15-201ENST00000507326 574 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 RN7SKP13-201ENST00000515933 244 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 MED28P5-201ENST00000528254 438 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AL845331.3-202ENST00000562856 261 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 MIR4504-201ENST00000577413 92 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC092474.3-201ENST00000603022 568 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC006557.5-201ENST00000603126 811 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AL109618.2-201ENST00000605527 211 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 SNORA51-201ENST00000606420 132 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC096586.1-201ENST00000610267 561 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC006213.5-201ENST00000619673 288 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC039056.2-201ENST00000622261 511 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AL161637.1-201ENST00000622380 412 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AC034229.5-201ENST00000624258 185 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 AL590396.2-201ENST00000636511 1041 ntBASIC3.08□□□□□ -1.92
CSNK1A1P48729 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
CSNK1A1P48729 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSNK1A1P48729 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.07□□□□□ -1.92
CSNK1A1P48729 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSNK1A1P48729 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CSNK1A1P48729 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CSNK1A1P48729 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CSNK1A1P48729 MIR16-2-201ENST00000362117 81 ntBASIC3.07□□□□□ -1.92
CSNK1A1P48729 Y_RNA.110-201ENST00000363220 99 ntBASIC3.07□□□□□ -1.92
CSNK1A1P48729 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.07□□□□□ -1.92
CSNK1A1P48729 MIR218-2-201ENST00000385006 110 ntBASIC3.07□□□□□ -1.92
CSNK1A1P48729 MIR134-201ENST00000385258 73 ntBASIC3.07□□□□□ -1.92
CSNK1A1P48729 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CSNK1A1P48729 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSNK1A1P48729 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.07□□□□□ -1.92
CSNK1A1P48729 RPS3AP9-201ENST00000417027 792 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms