Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NKX2-1P43699 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-1P43699 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NKX2-1P43699 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.54□□□□□ -1.84
NKX2-1P43699 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 MAPK10-373ENST00000641983 6772 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 DHX40P1-201ENST00000588725 1412 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 MTND5P24-201ENST00000438892 1767 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-1P43699 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
NKX2-1P43699 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 CYCSP45-201ENST00000402289 315 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 USP9YP33-201ENST00000412220 421 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 EI24P1-201ENST00000416584 867 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 SEPT2P1-201ENST00000419651 180 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC244098.2-201ENST00000422068 99 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 MRPS18BP2-201ENST00000434310 759 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 VN1R54P-201ENST00000435210 1049 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-1P43699 USP9YP35-201ENST00000435696 412 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 USP9YP7-201ENST00000436723 430 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 HMGN2P21-201ENST00000447764 270 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 USP9YP32-201ENST00000452432 430 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 MTCO2P18-201ENST00000457151 658 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 MTND2P28-201ENST00000457540 1044 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC087312.1-201ENST00000471411 480 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 RN7SL812P-201ENST00000493791 279 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 CYCSP2-201ENST00000558168 301 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC044860.2-201ENST00000561005 179 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC009117.1-201ENST00000563948 554 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AP005136.1-201ENST00000579765 429 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.53□□□□□ -1.84
NKX2-1P43699 MIR3667-201ENST00000581025 74 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC015726.1-201ENST00000602353 681 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AL512782.1-201ENST00000603093 364 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AL596327.1-201ENST00000603629 213 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 RNU6-88P-201ENST00000606801 100 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AC211433.2-201ENST00000608433 387 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AL121873.1-201ENST00000616013 524 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.53□□□□□ -1.84
NKX2-1P43699 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC099063.3-201ENST00000642066 185 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.53□□□□□ -1.84
NKX2-1P43699 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC131971.1-201ENST00000332881 1482 ntBASIC3.53□□□□□ -1.84
NKX2-1P43699 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NKX2-1P43699 AC087359.1-201ENST00000508335 1740 ntBASIC3.53□□□□□ -1.85
NKX2-1P43699 AC073429.2-201ENST00000569694 1444 ntBASIC3.53□□□□□ -1.85
NKX2-1P43699 AP002907.1-201ENST00000606361 1430 ntBASIC3.53□□□□□ -1.85
NKX2-1P43699 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.53□□□□□ -1.85
NKX2-1P43699 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 LINC02471-203ENST00000641941 4752 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 MTCO1P14-201ENST00000441695 1559 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-1P43699 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 RPL23AP57-201ENST00000332361 466 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-1P43699 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms