Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC011374.2-201ENST00000607135 526 ntBASIC3.4□□□□□ -1.87
TNFSF9P41273 AL359535.1-201ENST00000612100 1087 ntBASIC3.4□□□□□ -1.87
TNFSF9P41273 AL162233.1-201ENST00000620014 944 ntBASIC3.4□□□□□ -1.87
TNFSF9P41273 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFSF9P41273 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TNFSF9P41273 AC095050.2-201ENST00000510748 1458 ntBASIC3.4□□□□□ -1.87
TNFSF9P41273 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFSF9P41273 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFSF9P41273 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF9P41273 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.39□□□□□ -1.87
TNFSF9P41273 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF9P41273 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFSF9P41273 RNU1-75P-201ENST00000347264 129 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC241520.1-201ENST00000422654 1099 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 MTND4P24-201ENST00000424002 397 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 AC011242.1-201ENST00000433596 1158 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC078817.1-201ENST00000492623 435 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 RPL5P23-201ENST00000496040 868 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 AC098799.1-201ENST00000504752 800 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC008885.1-201ENST00000514930 301 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 RNU4-60P-201ENST00000517239 135 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 AC079610.2-201ENST00000604818 690 ntBASIC3.39□□□□□ -1.87
TNFSF9P41273 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFSF9P41273 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFSF9P41273 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFSF9P41273 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFSF9P41273 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF9P41273 ZNF90P1-201ENST00000480493 1951 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF9P41273 MTND5P3-201ENST00000438536 1800 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TNFSF9P41273 AL122016.1-201ENST00000403365 367 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.38□□□□□ -1.87
TNFSF9P41273 MTND4LP7-201ENST00000431728 294 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 RPL23AP33-201ENST00000442301 452 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 EXTL2P1-201ENST00000446218 416 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC016696.1-201ENST00000446949 318 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFSF9P41273 RPL29P29-201ENST00000448725 423 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AP001486.1-201ENST00000463339 476 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 CYCSP20-201ENST00000473154 315 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC104689.1-201ENST00000473356 768 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC092451.1-201ENST00000480211 153 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AL049873.1-201ENST00000480540 376 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 RPS4XP22-201ENST00000480755 780 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC106872.2-201ENST00000494303 480 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFSF9P41273 SNORA48.9-201ENST00000516419 162 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 RNU1-103P-201ENST00000516502 125 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 RN7SKP96-201ENST00000516948 297 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 CIR1P1-201ENST00000524055 1133 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 C1DP5-201ENST00000525775 383 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.38□□□□□ -1.87
TNFSF9P41273 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFSF9P41273 OR6C73P-201ENST00000546432 358 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC074029.1-201ENST00000552531 1044 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFSF9P41273 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFSF9P41273 AL162274.2-201ENST00000614406 332 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC025016.1-201ENST00000616746 682 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFSF9P41273 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC099506.2-201ENST00000623074 221 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC090617.9-201ENST00000623751 147 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF9P41273 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF9P41273 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF9P41273 XPOTP1-201ENST00000443317 2398 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TNFSF9P41273 EXOC5P1-201ENST00000510543 1969 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFSF9P41273 MTND5P24-201ENST00000438892 1767 ntBASIC3.38□□□□□ -1.87
TNFSF9P41273 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFSF9P41273 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFSF9P41273 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFSF9P41273 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TNFSF9P41273 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TNFSF9P41273 PRRC2CP1-201ENST00000404428 159 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 SNORA11.2-201ENST00000408318 127 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.37□□□□□ -1.87
TNFSF9P41273 RNA5SP107-201ENST00000411358 122 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 RPS7P13-201ENST00000413955 498 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFSF9P41273 TRIM60P13-201ENST00000432350 1283 ntBASIC3.37□□□□□ -1.87
TNFSF9P41273 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFSF9P41273 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms