Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RN7SKP289-201ENST00000517244 295 ntBASIC3.18□□□□□ -1.9
RFC3P40938 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.18□□□□□ -1.9
RFC3P40938 AC006518.1-201ENST00000541449 943 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.18□□□□□ -1.9
RFC3P40938 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 KLKP1-201ENST00000595979 403 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AC008687.2-201ENST00000597865 520 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AL031985.2-201ENST00000600955 480 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AC040174.2-201ENST00000602701 465 ntBASIC3.18□□□□□ -1.9
RFC3P40938 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 AL732372.2-225ENST00000642124 456 ntBASIC3.18□□□□□ -1.9
RFC3P40938 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
RFC3P40938 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
RFC3P40938 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFC3P40938 AC021755.1-201ENST00000559747 1447 ntBASIC3.18□□□□□ -1.9
RFC3P40938 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.18□□□□□ -1.9
RFC3P40938 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFC3P40938 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFC3P40938 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFC3P40938 SNORA7.2-201ENST00000364446 145 ntBASIC3.17□□□□□ -1.9
RFC3P40938 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
RFC3P40938 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RFC3P40938 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.17□□□□□ -1.9
RFC3P40938 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFC3P40938 MIR1250-201ENST00000408098 113 ntBASIC3.17□□□□□ -1.9
RFC3P40938 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 RPS7P13-201ENST00000413955 498 ntBASIC3.17□□□□□ -1.9
RFC3P40938 MTND2P16-201ENST00000419987 799 ntBASIC3.17□□□□□ -1.9
RFC3P40938 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.17□□□□□ -1.9
RFC3P40938 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
RFC3P40938 MOB1AP1-201ENST00000430903 535 ntBASIC3.17□□□□□ -1.9
RFC3P40938 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.17□□□□□ -1.9
RFC3P40938 RBMY2UP-201ENST00000453474 324 ntBASIC3.17□□□□□ -1.9
RFC3P40938 AL035407.2-201ENST00000454090 378 ntBASIC3.17□□□□□ -1.9
RFC3P40938 RN7SL601P-201ENST00000471221 293 ntBASIC3.17□□□□□ -1.9
RFC3P40938 RN7SL442P-201ENST00000473804 320 ntBASIC3.17□□□□□ -1.9
RFC3P40938 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFC3P40938 AC015724.1-201ENST00000478577 156 ntBASIC3.17□□□□□ -1.9
RFC3P40938 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.17□□□□□ -1.9
RFC3P40938 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
RFC3P40938 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 OR4R3P-201ENST00000525084 838 ntBASIC3.17□□□□□ -1.9
RFC3P40938 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.17□□□□□ -1.9
RFC3P40938 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.17□□□□□ -1.9
RFC3P40938 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.17□□□□□ -1.9
RFC3P40938 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.17□□□□□ -1.9
RFC3P40938 AC007566.2-201ENST00000603642 413 ntBASIC3.17□□□□□ -1.9
RFC3P40938 AL450270.1-201ENST00000606160 391 ntBASIC3.17□□□□□ -1.9
RFC3P40938 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.17□□□□□ -1.9
RFC3P40938 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.17□□□□□ -1.9
RFC3P40938 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.17□□□□□ -1.9
RFC3P40938 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFC3P40938 AL513302.2-201ENST00000562313 1842 ntBASIC3.16□□□□□ -1.9
RFC3P40938 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 ELL2P4-201ENST00000446870 1376 ntBASIC3.16□□□□□ -1.9
RFC3P40938 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 MIR483-201ENST00000385070 76 ntBASIC3.16□□□□□ -1.9
RFC3P40938 NPM1P10-201ENST00000398310 865 ntBASIC3.16□□□□□ -1.9
RFC3P40938 MTCYBP24-201ENST00000420387 1106 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AC093422.3-201ENST00000428506 305 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.16□□□□□ -1.9
RFC3P40938 MRPS18BP2-201ENST00000434310 759 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.16□□□□□ -1.9
RFC3P40938 AL691517.1-201ENST00000440833 1235 ntBASIC3.16□□□□□ -1.9
RFC3P40938 RPS26P56-201ENST00000444468 240 ntBASIC3.16□□□□□ -1.9
RFC3P40938 TPRKBP1-201ENST00000456243 481 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.16□□□□□ -1.9
RFC3P40938 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AC087312.1-201ENST00000471411 480 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AC084357.1-201ENST00000473404 255 ntBASIC3.16□□□□□ -1.9
RFC3P40938 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.16□□□□□ -1.9
RFC3P40938 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.16□□□□□ -1.9
RFC3P40938 AC133963.2-201ENST00000513686 578 ntBASIC3.16□□□□□ -1.9
RFC3P40938 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.16□□□□□ -1.9
RFC3P40938 SNORA74D-201ENST00000516404 141 ntBASIC3.16□□□□□ -1.9
RFC3P40938 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
RFC3P40938 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.16□□□□□ -1.9
RFC3P40938 AC026616.1-201ENST00000523157 525 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AF279873.1-201ENST00000523393 313 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AP001636.2-201ENST00000525517 696 ntBASIC3.16□□□□□ -1.9
RFC3P40938 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFC3P40938 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.16□□□□□ -1.9
RFC3P40938 MIR4504-201ENST00000577413 92 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.16□□□□□ -1.9
RFC3P40938 SNRPGP15-201ENST00000600149 222 ntBASIC3.16□□□□□ -1.9
RFC3P40938 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.16□□□□□ -1.9
RFC3P40938 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.16□□□□□ -1.9
RFC3P40938 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms