Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AC107068.1-201ENST00000563286 4218 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 AL731532.2-201ENST00000623542 1953 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TNFSF4P23510 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TNFSF4P23510 AP001350.1-201ENST00000601906 1524 ntBASIC4.31□□□□□ -1.72
TNFSF4P23510 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF4P23510 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 Y_RNA.194-201ENST00000363985 102 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF4P23510 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF4P23510 MIR135A2-201ENST00000384854 100 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AL078599.1-201ENST00000402075 293 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AL645733.1-201ENST00000402250 217 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.3□□□□□ -1.72
TNFSF4P23510 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC233728.2-201ENST00000425348 757 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 FTH1P6-201ENST00000430768 320 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 MTCO3P5-201ENST00000433620 714 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC092641.1-201ENST00000440229 772 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AL033528.1-201ENST00000453780 140 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC099563.1-201ENST00000456086 418 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 snoU13.24-201ENST00000458998 104 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 ARL2BPP4-201ENST00000506854 471 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC022447.1-201ENST00000515358 464 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AP000907.2-201ENST00000530827 353 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC027369.5-201ENST00000533838 755 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 RFPL1S-203ENST00000539579 330 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC051619.2-201ENST00000559063 397 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 OR4K8P-201ENST00000578842 1048 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF4P23510 MIR3611-201ENST00000584484 83 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC011487.3-201ENST00000593607 453 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC068790.3-201ENST00000602988 553 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.3□□□□□ -1.72
TNFSF4P23510 MIR7155-201ENST00000615925 56 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AL139089.1-201ENST00000620372 975 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC091905.4-201ENST00000623432 202 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC112200.1-201ENST00000625015 234 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC006971.1-201ENST00000407916 4486 ntBASIC4.3□□□□□ -1.72
TNFSF4P23510 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TNFSF4P23510 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.3□□□□□ -1.72
TNFSF4P23510 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.3□□□□□ -1.72
TNFSF4P23510 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TNFSF4P23510 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF4P23510 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF4P23510 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF4P23510 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF4P23510 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF4P23510 RNU1-106P-201ENST00000384382 164 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 MIR607-201ENST00000385241 96 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 SNORA40.3-201ENST00000390964 122 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 AC078974.1-201ENST00000411597 223 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 COX5BP7-201ENST00000414780 274 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF4P23510 USP9YP13-201ENST00000417797 480 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 TOMM22P1-201ENST00000418578 312 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 AC013429.2-201ENST00000418798 781 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.29□□□□□ -1.72
TNFSF4P23510 AC006366.1-201ENST00000422002 759 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.29□□□□□ -1.72
TNFSF4P23510 BX890604.2-201ENST00000427883 474 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFSF4P23510 AC068287.1-201ENST00000430283 295 ntBASIC4.29□□□□□ -1.72
TNFSF4P23510 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFSF4P23510 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.29□□□□□ -1.72
TNFSF4P23510 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFSF4P23510 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.29□□□□□ -1.72
TNFSF4P23510 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TNFSF4P23510 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms