Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH3P22223 AC053481.4-201ENST00000583164 216 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC010928.3-201ENST00000587712 541 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC022916.3-201ENST00000592961 742 ntBASIC3.9□□□□□ -1.79
CDH3P22223 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 AC021749.1-201ENST00000604322 607 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC114878.2-201ENST00000604863 1251 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AL354760.1-201ENST00000608357 643 ntBASIC3.9□□□□□ -1.79
CDH3P22223 MIR6868-201ENST00000611215 58 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC064801.1-201ENST00000612025 407 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC107075.1-201ENST00000613695 314 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC023158.2-201ENST00000614876 543 ntBASIC3.9□□□□□ -1.79
CDH3P22223 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 AC009159.2-201ENST00000617603 606 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AC048347.1-201ENST00000624621 427 ntBASIC3.9□□□□□ -1.79
CDH3P22223 AF001550.2-201ENST00000636643 217 ntBASIC3.9□□□□□ -1.79
CDH3P22223 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH3P22223 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CDH3P22223 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH3P22223 AC090337.1-201ENST00000579651 2074 ntBASIC3.9□□□□□ -1.79
CDH3P22223 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH3P22223 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 PTMAP5-201ENST00000393073 333 ntBASIC3.89□□□□□ -1.79
CDH3P22223 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH3P22223 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH3P22223 RNU2-21P-201ENST00000410368 188 ntBASIC3.89□□□□□ -1.79
CDH3P22223 FCF1P2-201ENST00000415284 583 ntBASIC3.89□□□□□ -1.79
CDH3P22223 AC008280.1-201ENST00000418851 412 ntBASIC3.89□□□□□ -1.79
CDH3P22223 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH3P22223 SEPT7P5-201ENST00000434048 306 ntBASIC3.89□□□□□ -1.79
CDH3P22223 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 RPL23AP76-201ENST00000441860 458 ntBASIC3.89□□□□□ -1.79
CDH3P22223 AC007327.1-201ENST00000447461 264 ntBASIC3.89□□□□□ -1.79
CDH3P22223 CFTRP1-201ENST00000456646 183 ntBASIC3.89□□□□□ -1.79
CDH3P22223 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.89□□□□□ -1.79
CDH3P22223 RN7SL132P-201ENST00000478131 296 ntBASIC3.89□□□□□ -1.79
CDH3P22223 VN1R105P-201ENST00000486595 910 ntBASIC3.89□□□□□ -1.79
CDH3P22223 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH3P22223 AC093755.1-201ENST00000512950 1023 ntBASIC3.89□□□□□ -1.79
CDH3P22223 MRPS36P3-201ENST00000519284 130 ntBASIC3.89□□□□□ -1.79
CDH3P22223 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 LRRC34P1-201ENST00000542742 915 ntBASIC3.89□□□□□ -1.79
CDH3P22223 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH3P22223 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH3P22223 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH3P22223 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 AC106785.1-201ENST00000565935 262 ntBASIC3.89□□□□□ -1.79
CDH3P22223 GAS5-AS1-201ENST00000602767 694 ntBASIC3.89□□□□□ -1.79
CDH3P22223 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.89□□□□□ -1.79
CDH3P22223 AC007349.4-201ENST00000608114 532 ntBASIC3.89□□□□□ -1.79
CDH3P22223 AL359535.1-201ENST00000612100 1087 ntBASIC3.89□□□□□ -1.79
CDH3P22223 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CDH3P22223 AC244205.2-202ENST00000635781 342 ntBASIC3.89□□□□□ -1.79
CDH3P22223 MIR4496-201ENST00000635896 61 ntBASIC3.89□□□□□ -1.79
CDH3P22223 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH3P22223 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH3P22223 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CDH3P22223 AL353746.1-201ENST00000566293 6881 ntBASIC3.89□□□□□ -1.79
CDH3P22223 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CDH3P22223 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH3P22223 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH3P22223 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH3P22223 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH3P22223 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDH3P22223 RNU6-444P-201ENST00000383988 108 ntBASIC3.88□□□□□ -1.79
CDH3P22223 SNORA37-201ENST00000384504 129 ntBASIC3.88□□□□□ -1.79
CDH3P22223 DSTNP4-201ENST00000399472 474 ntBASIC3.88□□□□□ -1.79
CDH3P22223 MTCO3P31-201ENST00000405526 789 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AL133264.1-201ENST00000407157 562 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AL136133.1-201ENST00000413694 376 ntBASIC3.88□□□□□ -1.79
CDH3P22223 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH3P22223 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AC233981.1-201ENST00000423224 461 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 GTF2IP23-201ENST00000423746 351 ntBASIC3.88□□□□□ -1.79
CDH3P22223 IFNNP1-201ENST00000429219 553 ntBASIC3.88□□□□□ -1.79
CDH3P22223 VDAC1P6-201ENST00000430062 855 ntBASIC3.88□□□□□ -1.79
CDH3P22223 USP9YP22-201ENST00000438971 294 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AL591719.1-201ENST00000444669 744 ntBASIC3.88□□□□□ -1.79
CDH3P22223 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH3P22223 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AC007537.2-201ENST00000472093 511 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH3P22223 AC091951.3-201ENST00000504093 246 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms